Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03488 ATGACGAAGAAAAATAGTACTGGGTCTACAAGTAGAGCTGCAAGTATGAATGCCTCAAGTCTTATGCCATCGATTACTCCCTCTTTAGGTGATGCTATTCAACCTCCACCAATTGCAGCTCCATCACAATCAGAACAAGTGCCAAAGGTTCCTACACAACAAAGGTCATCTGAACAACACAATGAACTCAAGAGATTTTGTATAAAGAACCCTAATAGGGTATGTGGTCATTTTAATAGGGTAGGTGATGATGCATTTTTCAAGTATTGTGGGAAATTATACAAGGCTAATAATAAAAAATGTGGAACCATTAACTTGATCAAACATGTGAGATTTTGTATGAAGAACCCTAATAGGGAGGTTGACAAGAAACAAAAGACATTGGCTGTTGGAAAGGAACATGAGGAGTCACCATGGCAGCCATCACAGAACAGAACCCTTCTCTCTCTCAACAAAAACTTCACTGCAGGCTTCTTTTCCGTACCAAACTCCAACCTTTTTACCTTCTCAATTTGGTACTCCAAAGTGCCTCTAAGTGCAGGCCCTCTTGTGTGGAGTACCATAACTAAAGTGAACGGTTCTGGTACCCTTGAGATCAACTCCAAAGGTGAACTTCTCCTCAATGGTTCACCCTTTCAAGATTCTGACTCTAACAATGCTACATCCCCCTCCAATTCAACCCAACTTGTTCTCCACGATGATGGAAACTTGGTTTTTGGGAGCTGGAGCAGCTTCAAGAACCCCACCAACACCGTTTTGCCCAACCAGAACTTCAGCACAGGGTTTGAGCTTCACTCCAACAATGGGAAATTCAGGTTCATCAAGGCAAAGACGCTGGTCCTCAACGCCACCTCTGATGAATACTACAGCACCCCAAACACCTTGTTGAGCATGGATGATCTAGGAAAAATGAGCATGGAGGGTAACTCTTTCCTCACTTCTGACTATGGAGACTCCAGATTCAGGAAACTGGTCCTTGATGATGATGGGAATCTCAGGACATATAGCTTCTACCCTGAGCAGAAAAATCAGTGGGTTGAGGTTTGGAAAGGGATATGGGAGATGTGCAAAATCAAAGGAAAATGTGGCCCTAATGCAATTTGTGTGCCTAAAGAGGATTTGAGCACTTCCACTTATTGTGTTTGTCCATCTGGGTTCACCTCAAAACATGGTGGGACTGAAGAGGGTTGCCAAAGGAAAATCCCTCTTTCCCAACAAACCCAATTTATGAGACTCGATTATGTGAACTATACCAGTGATGGTAGTTTGCATGAAATCAAGGCTAATAACTTCACAATCTGTGAGTCCAGTTGCACAAGAGACAAAAACTGTCTTGGGTTTGGCTTCAAGTATGATGGATCTGGATACTGTGTGTTGCTCAGTGGCACAAATCTTCAATATGGGTACTGGTCACCAGGCACTGAGACTGCCATGTTTGTGAAGGTTGACAAATCTGAGTCATCAGCATCCAACTTCATTGGCATGACTGAGGTGATGCAAACCACATGTCCTGTGAACATAAGCCTCCCACTTCCTCCAAAGGACTCCAACACCACTGCAAGAAACATTGCCATAATCTGCACCCTTTTTGCTGCAGAACTCATAGCTGGGGTGGCCTTTTTCTGGTCCTTCTTGAAGAGGTACATAAAGTATAGGGACATGGCCACCACACTTGGTCTTGAGCTTCTTCCTGCTGGTGGCCCCAAGAGGTTCACCTACTCAGAAATCAAGGTCGCAACCAATGACTTCTCCAACCTAATAGGCAAAGGGGGCTTTGGAGATGTCTACAAAGGTGAGTTGCCGGATCACAGGGTGGTGGCTGTGAAGTGCCTCAAGAATGTCACTGGAGGGGATGCTGAGTTTTGGGCAGAAGTCACAATCATTGCCAGAATGCACCATCTCAACTTGGTCAGGTTGTGGGGCTTCTGTGCAGAGAAAGGCCAAAGGATACTTGTCTATGAACACATCCCTGGTGGCTCACTGGATAAGTACCTCTTCAGGGTTAACAAGTCCCATAACAACAACCTTCTCAAAGAACAATCAAGTCCAAACACACCTCCACAAAGACCTGTTTTGGATTGGAGCATCAGGTACAGAATAGCCCTCGGTGTGGCAAGGGCTATTGCATACTTACATGAGGAGTGTTTGGAGTGGGTTTTGCACTGTGACATCAAACCAGAGAACATTTTACTAGGGGATGATTTTTGTCCCAAGATTTCAGATTTTGGGTTGGCCAAGTTGAGGAAAAAAGAGGACATGGTTACCATGTCAAGGAGGAGGGGCACTCCAGGGTACATGGCACCTGAATGGATCACTGCTGACCCAATCACTTCAAAAGCTGATGTGTATAGTTTTGGTATGGTGCTTTTGGAGCTTGTGAGTGGGATTAGGAACTTTGAGATCCAAGGATCTGTGGTTAGAAGTGATGAGTGGTACTTCCCTGGTTGGGCCTTTGATAAGATGTTTAAGGAAATGAGAGTTGAGGAAATTTTGGATGGGCAGATTAGGGATACTTATGATAGTAGGGCCCACTTTGACATGGTTAATAGAATGGTGAAGACTGCCATGTGGTGTCTACAGGACAGGCCCGAGTTGAGGCCCACTATGGGAAAGGTGGCCAAGATGTTAGAAGGGACTGTGGAGATCACTGAACCCAAAAAGCCCACAGTTTTCTTCCTTGGTGAAGAGTAG 2691 0.4485 MTKKNSTGSTSRAASMNASSLMPSITPSLGDAIQPPPIAAPSQSEQVPKVPTQQRSSEQHNELKRFCIKNPNRVCGHFNRVGDDAFFKYCGKLYKANNKKCGTINLIKHVRFCMKNPNREVDKKQKTLAVGKEHEESPWQPSQNRTLLSLNKNFTAGFFSVPNSNLFTFSIWYSKVPLSAGPLVWSTITKVNGSGTLEINSKGELLLNGSPFQDSDSNNATSPSNSTQLVLHDDGNLVFGSWSSFKNPTNTVLPNQNFSTGFELHSNNGKFRFIKAKTLVLNATSDEYYSTPNTLLSMDDLGKMSMEGNSFLTSDYGDSRFRKLVLDDDGNLRTYSFYPEQKNQWVEVWKGIWEMCKIKGKCGPNAICVPKEDLSTSTYCVCPSGFTSKHGGTEEGCQRKIPLSQQTQFMRLDYVNYTSDGSLHEIKANNFTICESSCTRDKNCLGFGFKYDGSGYCVLLSGTNLQYGYWSPGTETAMFVKVDKSESSASNFIGMTEVMQTTCPVNISLPLPPKDSNTTARNIAIICTLFAAELIAGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTYSEIKVATNDFSNLIGKGGFGDVYKGELPDHRVVAVKCLKNVTGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILVYEHIPGGSLDKYLFRVNKSHNNNLLKEQSSPNTPPQRPVLDWSIRYRIALGVARAIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTMSRRRGTPGYMAPEWITADPITSKADVYSFGMVLLELVSGIRNFEIQGSVVRSDEWYFPGWAFDKMFKEMRVEEILDGQIRDTYDSRAHFDMVNRMVKTAMWCLQDRPELRPTMGKVAKMLEGTVEITEPKKPTVFFLGEE 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03488 896 PANTHER OS07G0415500 PROTEIN 120 891 - -
Pste1g03488 896 ProSiteProfiles Protein kinase domain profile. 581 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03488 896 FunFam Serine/threonine-protein kinase 656 887 - -
Pste1g03488 896 Pfam S-locus glycoprotein domain 310 389 IPR000858 GO:0048544
Pste1g03488 896 Pfam Protein kinase domain 585 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03488 896 MobiDBLite consensus disorder prediction 1 58 - -
Pste1g03488 896 ProSiteProfiles EGF-like domain profile. 352 392 IPR000742 -
Pste1g03488 896 SUPERFAMILY Protein kinase-like (PK-like) 563 877 IPR011009 -
Pste1g03488 896 CDD STKc_IRAK 587 878 - -
Pste1g03488 896 SMART serkin_6 581 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03488 896 ProSiteProfiles PAN/Apple domain profile. 397 483 IPR003609 -
Pste1g03488 896 SMART blect_4 142 248 IPR001480 -
Pste1g03488 896 Gene3D Transferase(Phosphotransferase) domain 1 657 888 - -
Pste1g03488 896 ProSitePatterns Serine/Threonine protein kinases active-site signature. 719 731 IPR008271 GO:0004672|GO:0006468
Pste1g03488 896 PIRSF SRK 120 896 IPR024171 GO:0004674
Pste1g03488 896 Gene3D - 137 246 IPR036426 -
Pste1g03488 896 MobiDBLite consensus disorder prediction 1 27 - -
Pste1g03488 896 SUPERFAMILY alpha-D-mannose-specific plant lectins 170 262 IPR036426 -
Pste1g03488 896 Gene3D Phosphorylase Kinase; domain 1 555 655 - -
Pste1g03488 896 CDD EGF 356 387 - -
Pste1g03488 896 FunFam S-receptor-like serine/threonine-protein kinase 553 655 - -
Pste1g03488 896 ProSitePatterns Protein kinases ATP-binding region signature. 587 609 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03488 Pste-Chr1 16302724 16309089 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03488 415 879 Receptor kinase-like Gene Family AT4G18250 33.888 3.69e-75 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pste1g03488 Pkinase 1.1e-44 CL0016