Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03487 ATGTGGTTATGGCAAACTATATCTTTTCATGTTAAAGCAGTAAATGACAGTTTGAAGCCAGGAGATATACTGAATAACACAACCGAGCTATGTTCTGAAAATAGAACATATTGCTTGAGGTTTGGGCCAACCAGTAATATTAAAGATGGTGGTTACTTGCGCATGTATTATGAAGGAGAAAATGGTTGGGTAGTGTGGATAGCAAATAGAAACCAACCTGTTGACTTAGACTCGGCAACTTTATTGCTGAACCACTCTGGTGTACTAGAGATCAAATCCAAAGACAAGGAATCAATAATCCTTTACTCTTCACCTCAACCTGTTCACAACACTGTGGCCATCTTGTTGGATACAGGAAATTTTGTGTTGCAACAACTTCACTCCAATGGGTCTAAAAATGTGTTATGGCAAAGTTTTGATTACCCTGGTGATACTTTGATCCCAGGAATGAAGTTAGGAGTTAATCACAGAAGTGGTCATAATTGGTCACTAGTTTCATGGTTTAGCAAATCCATCCCAGCTCCTGGTCCATTTAGACTTGAATGGGAACCCCAAAAGAAAGAATTGATCATCAAGAGACAAGGACAAGTTTGTTGGAGAAGTGGAGAACTTAGGAAGAAGAAAAGATTAGAGCATGTTTGGGAGTCCCAGTACACTGTTGTCTCAAATGAAGATGAAGATTCCTTTGAATTGACATTCTCAAATGATGAGCGCATAAAATGGACGTTAATGGAAAATGGACAACTGATAAATAGGGAAGGAAGTGATATTGCAAGGGCTGATTTATGTTATGGGTACAATACTGAAGAAGGGTGCCAAAAATGGGAGGAGATACCCAAATGCAGGCACCATGGTGATGCATTTCAGATCGTGCAAGGTTTCCCTGATTCAAACATGAGAAGCAATCTAGAAAATTCCAGTTATGGCGTAAGTGATTGCAGGGCTATTTGCTGGAACAACTGTAGCTGCACTGCATTCAAAGAATACTATGATAATGGAACCGGTTGTGTTTTCTTTCATTGGCATTCAATGGAAGGCGCAAAAAAGTGGATATGGATAAGCATTGTAATGGCAATTTCACTATTCGTAATTTGCCTTTATTATGTAGGTTTCGCCTTAAAGAAAAGAAAATATATATTTAAAGGTAAGCAAAGTAGAGGAATGGAGATTAAGATGTTTGATTTAACAGGTTCAAATAGATCTTCTGGCATCAAAGATCTTCAAGATGATTTAAAAGGACACGGTTTAAAAGCATTTGACTATACACTAGTTGTGGAAGCCACAAATGATTTTTTATCTGAAAACAAGTTAGGACAGGGAGGCTTTGGACCAGTTTATAAGGGAGTCCTACCAACAGGACAAGAAGTTGCTGTAAAAAGACTTTCCAAAGCTTCTGGACAAGGAATTGTGGAATTCAAAAATGAAGTAACACTCATATCTGAGCTTCAGCACATGAATCTTGTACAACTACTTGGTTGCTGCATTCATGAAGAAGAGAGAATTCTAGTTTACCAGTATATGCCAAACAAAAGCTTGGATTTCTATCTATTTGATGGTACGAGGAGCAAGTTATTAGATTGGAAGAAGCGGTTCAACATAATAGAAGGAATTTCTCAAGGATTACTTTATCTTCACAAGTATTCAAGACTTAAAATCATTCACAGAGACTTGAAAGCTAGTAACATACTTCTTGATGAGAACATGAATCCAAAAATTTCAGATTTTGGAATGGCAAGAATGTTTAGCCAACAAGAATCAGTATCAAGTACCAATAGGATTGTTGGCACATATGGTTACATGTCTCCAGAATATGCTATGGAAGGAGTTTTCTCAACAAAGTCAGATGTCTATAGTTTTGGAGTGTTGCTACTAGAAATTATAAGTGGAAGAAGAAACAATAGCTTCCATGATGCCAATGACGACCCACTAAATATAATAGGACATGCATGGGAGTTATGGAACAATGGTATGAGTTTACAGTTAGTGGATCCATCGCTCAATGAGTTGTTTGATCCAGATGAAGTGCAAAGATGCATTCATGTTGGTCTCTTATGTGTTGAACAATATCCAAATGATCGACCTACAATGTCTAACGTTATATCGATGTTAAAGAAAAGTGCAGCAATCACCTTGCCTCAAAGACCTGCATTCTGTAGTGGAAGACAGAACTTTGATGGGAAAACATATTCCAAAGAGTTATTTGCTGATTCTACAGAAGAAATTACTTCTTCCTTCACAAGAGAATCAATGTGAATTCCAAATAATTATTCATTGAAAAATTTTAATCTCTGG 2292 0.3713 MWLWQTISFHVKAVNDSLKPGDILNNTTELCSENRTYCLRFGPTSNIKDGGYLRMYYEGENGWVVWIANRNQPVDLDSATLLLNHSGVLEIKSKDKESIILYSSPQPVHNTVAILLDTGNFVLQQLHSNGSKNVLWQSFDYPGDTLIPGMKLGVNHRSGHNWSLVSWFSKSIPAPGPFRLEWEPQKKELIIKRQGQVCWRSGELRKKKRLEHVWESQYTVVSNEDEDSFELTFSNDERIKWTLMENGQLINREGSDIARADLCYGYNTEEGCQKWEEIPKCRHHGDAFQIVQGFPDSNMRSNLENSSYGVSDCRAICWNNCSCTAFKEYYDNGTGCVFFHWHSMEGAKKWIWISIVMAISLFVICLYYVGFALKKRKYIFKGKQSRGMEIKMFDLTGSNRSSGIKDLQDDLKGHGLKAFDYTLVVEATNDFLSENKLGQGGFGPVYKGVLPTGQEVAVKRLSKASGQGIVEFKNEVTLISELQHMNLVQLLGCCIHEEERILVYQYMPNKSLDFYLFDGTRSKLLDWKKRFNIIEGISQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARMFSQQESVSSTNRIVGTYGYMSPEYAMEGVFSTKSDVYSFGVLLLEIISGRRNNSFHDANDDPLNIIGHAWELWNNGMSLQLVDPSLNELFDPDEVQRCIHVGLLCVEQYPNDRPTMSNVISMLKKSAAITLPQRPAFCSGRQNFDGKTYSKELFADSTEEITSSFTRESM 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03487 750 SMART blect_4 21 142 IPR001480 -
Pste1g03487 750 SUPERFAMILY Protein kinase-like (PK-like) 417 713 IPR011009 -
Pste1g03487 750 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 507 711 - -
Pste1g03487 750 Gene3D Transferase(Phosphotransferase) domain 1 507 712 - -
Pste1g03487 750 Pfam PAN-like domain 281 340 IPR003609 -
Pste1g03487 750 Pfam D-mannose binding lectin 64 167 IPR001480 -
Pste1g03487 750 Gene3D - 9 139 IPR036426 -
Pste1g03487 750 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 122 725 - -
Pste1g03487 750 CDD STKc_IRAK 437 705 - -
Pste1g03487 750 Gene3D Phosphorylase Kinase; domain 1 396 506 - -
Pste1g03487 750 ProSiteProfiles Bulb-type lectin domain profile. 15 136 IPR001480 -
Pste1g03487 750 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 169 IPR036426 -
Pste1g03487 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 552 564 IPR008271 GO:0004672|GO:0006468
Pste1g03487 750 PIRSF SRK 2 260 IPR024171 GO:0004674
Pste1g03487 750 PIRSF SRK 258 349 IPR024171 GO:0004674
Pste1g03487 750 PIRSF SRK 341 749 IPR024171 GO:0004674
Pste1g03487 750 Pfam Protein tyrosine and serine/threonine kinase 434 703 IPR001245 GO:0004672|GO:0006468
Pste1g03487 750 SMART serkin_6 431 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03487 750 ProSiteProfiles Protein kinase domain profile. 431 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03487 750 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 396 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03487 Pste-Chr1 16292455 16296028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03487 409 750 Receptor kinase-like Gene Family AT4G11480 55.072 5.12e-125 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03487 PK_Tyr_Ser-Thr 7.3e-49 CL0016