Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03476 GAAAAGTGTTTGTTGATTATCCAGTCCAAGCAGTCCTGTCCTGTGAGTTTGAGGCTAAGCAATGAAGTTATTGAATTTGATATGATTGGTTTGGGCGATGCTGGTGCCATTGACATGGAGCAGCCTGTAAATAGTGACGCTGGTGGTACAGTTCCAGCTGATGATGTGGGACCTGACATAGCTGGAGGAGACACTAATCTTGAACCTTATAAAGGCATGGACTTTGAATCTGAAGAGGCTGCCAAGGCCTTTTATAATTCCTATGGTCGTCGTGTGGGCTTTAGCACACGGGTGAGCATGTCTCGGCGCTCCAGGCGGGATGGTTCTATAATTCAGAGGTCTTTTGTCTGTGCCAAGGAAGGTTTTCGTGTGGAGAAGGAGAAGCATATGGTTGATGGCAGAGTCAAGCGGCCTCGTGCTGAAACCCGCGTTGGTTGCAAGGCCATGCTGGTCGTCAAAATTCAAGATTCTGGCAGATGGGTCGTTTCTTCCTTTGTCAAGGAGCATAACCATGAATTAGTTCCCCCTGACAAGGTGCATTGCCTTCGTTCTCACCGTCATGTTTCAGGTCCAGCTAAGTCATTGATTGATACTTTGCAGGGTGCTGGAATAGGGCCTAGTCGAATAATGTCTGCACTAATAAAGGAATATGGTGGAATTACCAATGTTGGTTTCACTGAGCGTGACTGTAGGAATTATATGAGAAGCAGTAGGCAAAGAACCCTTGGAGGTGACACTCAAATCCTTTTGGATTACTTGAAGAGCAAACACGCAGAGAATCCTTCATTTTTCTATGCTGTACAAGGTGATGAAGATCATTGCATGAGTAATATCCTCTGGGTTGATCCCAACGCTAGGACTAACTATACTTACTTTGGTGACACTGTCACCTTTGACACAACATATAGGTCAAACCGCTATAGATTGCCTTTTGCACCTTTCACCGGCATAAATCATCATGGACAGCCTGTATTGTTTGGTTCCGCTCTCCTGATAAACGAATCTGAGGCATCTTTTGTCTGGCTTTTCAGAAGCTGGCTTGAAGCAATGTTGGGCAGACCTCCTGTTTCAATTACTACTGATCATGATAGGGTCATCCGTGCAGCCATCAACCATGTCTTTCCTGGTACCCGTCACCGATTTTGTAAGTGGCACATTTTTAAAGAGTGTCAAGAGAAGTTGTCTCTTGTACTTTCTCAACATCATAATTTTGAAGCTGATCTCCATAGATGTGTTAACCTCACAGAGTCCATTGAGGACTTTGAGTCTTGTTGGTCCTCTCTAATTGATAGGTATGGTCTCAAGGAACAGGAATGGCTCCAAGCAATTTATGGTGATAGGCGGCAGTGGGTACCAGTGTACTTGAGGGACACATTTTTTGCAGAAATGTCAATAACACAACGAAGTGATAGCATAAACTCTTATTTTGATGGCTATATCAATGCATCAACAACACTTCAGCTTTTTGTCAAGCAGTATGAGAAGGCTGTGGAGAGCCGTTATGAAAAAGAAGTCAAAGCTGATTATGACACAATTAACACTACTCCAATTCTGAAGACTCCATCACCTATGGAGAAACAGACAGCTGGAGTTTACACAAGGAGATTGTTTATCAAATTTCAAGAAGAGTTGGTTGAGACATTAACGTTCTTGGCAGACAAAGTAGAAGAAGAAGAAATTATTACTGTGTATAGAGTGGCCAAATATGGGGAAATTCACAAGGCCTACTTTGTCAGATTTAACTCTTTTGAGGTGAAAGCTACTTGTAGCTGCCAGATGTTTGAGTTTTCTGGTCTAGTTTGTAGACATATATTGACTGTTTTTAGGGTGATAAATCTTCTTACTTTACCATCTCATTATATTTTAAAAAGATGGAGCAGGATTGCTAAAAGTGGTGTCATATTGGGTGAACGTACTACTAATATGTCAAATGGTGCCCAAGAATCTCTAACCATCAGATACAACAATCTTCGTCTTGAGGCCCTCAAGTACGTTGACGAGGGAGTAACCTCTCTGAAAGTTTATGATGTAGCAACGCGTGCTCTTCGGGAGGCTGCGAATAGAGTGGCCCTTGTAACAAAAAATGGTGGAAACCAGGTTATTTTAAATGGAACCTGTGAAGAAGACCTTCATCAAAGCAATGAAGCAACTACTAGTCGCAGTGATCCTCCATTTGGTTCACAACAATCTTCATATAAGGATGACCAAGATAGAACAATTGAGAAGTTGACACGGCAACTTGACCGAGCTCGAAGGAAGTGTGAAGTTTATAGGTCCAATTTGCTATCAATTTTAAAAGATATTGAAGAGCAAAAGCTACACTTATCAGTTAAAGTTCAAAATATTAAGTTAGGAATGAAAGATTGA 2367 0.4191 EKCLLIIQSKQSCPVSLRLSNEVIEFDMIGLGDAGAIDMEQPVNSDAGGTVPADDVGPDIAGGDTNLEPYKGMDFESEEAAKAFYNSYGRRVGFSTRVSMSRRSRRDGSIIQRSFVCAKEGFRVEKEKHMVDGRVKRPRAETRVGCKAMLVVKIQDSGRWVVSSFVKEHNHELVPPDKVHCLRSHRHVSGPAKSLIDTLQGAGIGPSRIMSALIKEYGGITNVGFTERDCRNYMRSSRQRTLGGDTQILLDYLKSKHAENPSFFYAVQGDEDHCMSNILWVDPNARTNYTYFGDTVTFDTTYRSNRYRLPFAPFTGINHHGQPVLFGSALLINESEASFVWLFRSWLEAMLGRPPVSITTDHDRVIRAAINHVFPGTRHRFCKWHIFKECQEKLSLVLSQHHNFEADLHRCVNLTESIEDFESCWSSLIDRYGLKEQEWLQAIYGDRRQWVPVYLRDTFFAEMSITQRSDSINSYFDGYINASTTLQLFVKQYEKAVESRYEKEVKADYDTINTTPILKTPSPMEKQTAGVYTRRLFIKFQEELVETLTFLADKVEEEEIITVYRVAKYGEIHKAYFVRFNSFEVKATCSCQMFEFSGLVCRHILTVFRVINLLTLPSHYILKRWSRIAKSGVILGERTTNMSNGAQESLTIRYNNLRLEALKYVDEGVTSLKVYDVATRALREAANRVALVTKNGGNQVILNGTCEEDLHQSNEATTSRSDPPFGSQQSSYKDDQDRTIEKLTRQLDRARRKCEVYRSNLLSILKDIEEQKLHLSVKVQNIKLGMKD 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03476 788 ProSiteProfiles Zinc finger SWIM-type profile. 576 612 IPR007527 GO:0008270
Pste1g03476 788 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 690 IPR031052 GO:0006355
Pste1g03476 788 Pfam SWIM zinc finger 584 611 IPR007527 GO:0008270
Pste1g03476 788 Pfam MULE transposase domain 296 388 IPR018289 -
Pste1g03476 788 Coils Coil 733 760 - -
Pste1g03476 788 MobiDBLite consensus disorder prediction 711 738 - -
Pste1g03476 788 SMART 26again6 587 614 IPR006564 GO:0008270
Pste1g03476 788 MobiDBLite consensus disorder prediction 711 733 - -
Pste1g03476 788 Pfam FAR1 DNA-binding domain 84 175 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03476 Pste-Chr1 16245889 16249778 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pste1g03476 MULE 5e-27 CL0219