Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03435 ATAATCTACCAATTCATCCCATATCTTCCTAAACTCACAGGTGGGTGAAAATTCAACTATTTCATTTAATGGATCATCTTGGAATTCACCCCCCTTCAACCAAGGTTGAAAGAAGACTCGTTGAAAAAGACAGAAGAAACCAGATGAAGATTCTCTACAACAAACTCAACTCTCTTCTTCCCAGTTACAATCCCAAGGAACCATTACCACTGCCTGACCAAGTGGATGAGGCAATCAACTACATCAAGAGTTTGGAGGCCAAGGTGAAGATGGCACAAGACAAAAAAGAGAGTTTACAAGGAATTAGGAAGAGATCCCGTGGTTGCTCCTCCAATAACAATGCTAATTCTGCTGCCACTAATTTCACAAAATCGCCACAACTTGAGATTCACGAAGTGGGTTCCTCACTACAAGTTGTTCTAACTTGTGGGTTAGACTACCGCTTCATTTACTATGAGATCATTCGAATGCTGCATGAAGAGAACGTCGAGGTTAGAAGTGCCAATTCCTCAATGACTGGAGACTCAGTGCTTTATGTTGTGCATGCTGAGATTCCTCAATCTTCTCTCCAATTCGGAGCCACCAAAGTAAGTGATAAATTGAAAAGGTTTGTGTACGGATCCTGCAGTGACGTGGAAACCCAGCCCGAGTTGTGGGATTTTGAAATTGGTACTGATGTGTGGAGTTTCTAGATCTTACATTAATATGCTAGGATGCATTTACCAAAAGTTTTGTGATTAAAATAAGAGGAAAATAAAATTTCTTGACACATGAACGTGTTGCAATTGGTTTTGACCTGGAATTAATTAACTAACAAGATGGTTTGTCTTTCTCTTCTTCTTCTATGATTTGTCACTTTCAACATTAATTCAGAAAATCAAATTCTCCCTTCACAGTAAATTGATATATCTAGCTAGCTAACATAATTAAGAGGTGGACGGTGGTCAGTTTCATTGACTACGTACATCTGAAGCTACATATCAGGTTCTCATAGTAATCTAACATAACTAAGCAAACACATAAATGTTGTCCTCGGATCATCAGATATTGCACTCATCCTAATGACAAATTTCACAAGCTTCTTCTAAAACTCTCAATATGAGGTTCTGTTTGATGTCAATAAGCAAATTAAAAAATGTTGGAAAAAGTAGTGAACCAAAATGAAGATATTGGCTAGTACTTAAAAAGTTCATGGTTGCAGCCTTTGCAGGTGAAGATATTAATTGCTTCTGGATTAGACAGTTAACGAAAGATTCAATAGAATTGAACCCTCCTGAGTTAGTTTTCCTTTCCTTGTACTTCTCCCATTGGTTTTCAATTCTTGAGATTATTCCATGCGGCACACATCTTGCATCATCAGTTTTTGGGCTTCTTAAAACTTAACACATCTTGCATCATCAGTTTTTGGGCTTCTTAAAACTTAACATAAC 1430 0.3762 MDHLGIHPPSTKVERRLVEKDRRNQMKILYNKLNSLLPSYNPKEPLPLPDQVDEAINYIKSLEAKVKMAQDKKESLQGIRKRSRGCSSNNNANSAATNFTKSPQLEIHEVGSSLQVVLTCGLDYRFIYYEIIRMLHEENVEVRSANSSMTGDSVLYVVHAEIPQSSLQFGATKVSDKLKRFVYGSCSDVETQPELWDFEIGTDVWSF 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03435 207 Coils Coil 52 79 - -
Pste1g03435 207 Gene3D - 7 92 IPR036638 GO:0046983
Pste1g03435 207 MobiDBLite consensus disorder prediction 81 95 - -
Pste1g03435 207 FunFam Transcription factor bHLH162 5 88 - -
Pste1g03435 207 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 10 62 IPR011598 GO:0046983
Pste1g03435 207 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 183 - -
Pste1g03435 207 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 9 77 IPR036638 GO:0046983
Pste1g03435 207 Pfam Helix-loop-helix DNA-binding domain 13 63 IPR011598 GO:0046983
Pste1g03435 207 MobiDBLite consensus disorder prediction 76 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03435 Pste-Chr1 16003159 16005010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03435 10 182 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 37.079 3.53e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste1g03435 HLH 1.9e-07 No_clan