Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03428 ATGTCTACCCTTCTCCTCCCTTTGCTTCTTCTCATCACATACCTTAGCCTTCTAACCTCAGTTTCATCCGTAGAGTTCATCTACAACACCAACTTCAACTTCACCAACACCCTTCTCCATGGCAATGCCACCATTGAATCTTCCATTCTCACCCTCACCAACCGCTCCACCTTCTCTGTGGGCCGTGCTTTCTACCCTTCCAAGATCCCCACCAAATCTCCCAACTCTTCAACCCCTTTACCTTTCTCAACCTCCTTCATTTTCTCCATTGCCCCATTCAAAGACCTTCTCCCTGGCCATGGCTTTGCCTTCATATTGACACCTTCTGCAGGTACCACTGGGGTGAGTTCTGCTCAGCATCTTGGTCTTTTCAACTTGACCAACAATGGTAGTCCCAACAATCATGTCTTTGGCATTGAGTTTGATGTGTTCGACAACCAAGAGTTCAATGACATTAATGACAATCATGTGGGGGTGGACATAAACTCTCTTGTTTCTTTCACTTCCCATGCTGCTGGATTTTGGAGTGGTGACGAATTTGAGGATTTGAAGCTTAATGATGGTGAGAACTATCAAGTGTGGATTGATTATCTAGATTCTAGAGTTAATGTCACAATGGCTCTTGCAGGCCACAAAAGATCACAGAGACCTTTGATTAGTGAGTCTGTGAATCTTTCTGAAGTTCTTCTGGATGAAATGTACGTTGGATTCGGTGGGGCAACAGGGCAGCTTGTGGAGAGTCATAAGATTTTGGCTTGGAGCTTTAGTAACTCAAATTTTTCTATTGGTGATGCTTTGGTGACTGCAAATTTGCCCTCATTTGTGCTTCCCAATGAATCTGTTTTGATGTCAAAGGGTTTTATTGTAGGGATCATTACAGGTGTTTTGTTTGTCATAGGTAGTGCTGTTGTGATATTTGTGCTTTTTCTCAGAAGAAAAAGGAACAAAAGAAAGGAGCTACAAGAAGACATTGAGGATTGGGAATTAGAGTATTGGCCACACCGTGTTAGGTATGAAGATATTTATGCGGCCACTAAAGAATTTTCAGAGCAAAATGTAATTGGGTTTGGAGGGAATGGGAAAGTCTATAAAGGGCTTCTGCAAGGAGTACAAGTTGCAGTGAAAAGAATACCTTGTGACAGTGAACATGGAATGAGAGAGTTTTTGTCCGAGATTTCAAGTTTAGGCAGGTTGAAGCATAGGAATGTGGTTCCATTGAAAGGTTGGTCTAAGAAAGAGAAAGGGAGCTTGATTTTAATCTATGACTATATGGATAATGGGAGTTTAGATAAAAGAATATTTGACTGTGATGAGAGAGCAATTTTTGGGTGGGAAGAGAGAATCAAAGTGCTGAAGGATGTGGCACATGGAATATTGTATTTGCATGAAGGTTGGGAGGTTAAGGTGTTGCACAGAGACATCAAGTCGAGCAATGTGTTACTTGATAAGGATATGAATGCAAGGTTGGGGGATTTTGGACTAGCTAGAATGCATCATCATGAGCAGATTGCTCACACATCACAAGTGATTGGAACTGTTGGTTTCATGGCACCAGAACTTATTCATACGGGAAGAGCCTCAACTCAGACTGATGTGTTCAGTTTTGGTGTGTTGGTTTTAGAGGTGGTGTGTGGGAGAAGACCAACTGAAGAAACTAAGCCAGCTTTAGTTACTTGGTTATGGAAGCTAAAGGAGAAAGGAGAAGAGTGTTCTGCTCTTGATGAAAGATTAAAAGGGAGGAGTGAATGTAAAATTGATGAGGTTAAGAGGGTTCTTCATCTTGGTTTGTTATGCACTCATCCTGACCCTCTTGTTAGGCCAAGTATGAGACAAGTTGTGAAGGTGCTGGAGGGAGAGAATTTAGATGCGAACTTGCTAGACAGAATAAATTCAGCAGCTGGATATGTTGGAAGCTTTGGTAACAGCATTCATCCCACAATTGAGGATATTTTCTCGTCCCACTGTTCTTTTACAACACAATGA 1983 0.4191 MSTLLLPLLLLITYLSLLTSVSSVEFIYNTNFNFTNTLLHGNATIESSILTLTNRSTFSVGRAFYPSKIPTKSPNSSTPLPFSTSFIFSIAPFKDLLPGHGFAFILTPSAGTTGVSSAQHLGLFNLTNNGSPNNHVFGIEFDVFDNQEFNDINDNHVGVDINSLVSFTSHAAGFWSGDEFEDLKLNDGENYQVWIDYLDSRVNVTMALAGHKRSQRPLISESVNLSEVLLDEMYVGFGGATGQLVESHKILAWSFSNSNFSIGDALVTANLPSFVLPNESVLMSKGFIVGIITGVLFVIGSAVVIFVLFLRRKRNKRKELQEDIEDWELEYWPHRVRYEDIYAATKEFSEQNVIGFGGNGKVYKGLLQGVQVAVKRIPCDSEHGMREFLSEISSLGRLKHRNVVPLKGWSKKEKGSLILIYDYMDNGSLDKRIFDCDERAIFGWEERIKVLKDVAHGILYLHEGWEVKVLHRDIKSSNVLLDKDMNARLGDFGLARMHHHEQIAHTSQVIGTVGFMAPELIHTGRASTQTDVFSFGVLVLEVVCGRRPTEETKPALVTWLWKLKEKGEECSALDERLKGRSECKIDEVKRVLHLGLLCTHPDPLVRPSMRQVVKVLEGENLDANLLDRINSAAGYVGSFGNSIHPTIEDIFSSHCSFTTQ 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03428 660 Gene3D - 21 267 - -
Pste1g03428 660 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 308 423 - -
Pste1g03428 660 CDD lectin_legume_LecRK_Arcelin_ConA 24 258 IPR001220 GO:0030246
Pste1g03428 660 FunFam L-type lectin-domain containing receptor kinase S.4 424 628 - -
Pste1g03428 660 FunFam L-type lectin-domain containing receptor kinase S.4 22 263 - -
Pste1g03428 660 Gene3D Transferase(Phosphotransferase) domain 1 424 630 - -
Pste1g03428 660 ProSiteProfiles Protein kinase domain profile. 348 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03428 660 Coils Coil 310 330 - -
Pste1g03428 660 Gene3D Phosphorylase Kinase; domain 1 309 423 - -
Pste1g03428 660 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 260 IPR013320 -
Pste1g03428 660 SUPERFAMILY Protein kinase-like (PK-like) 323 617 IPR011009 -
Pste1g03428 660 PANTHER - 40 620 - -
Pste1g03428 660 Pfam Protein kinase domain 349 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03428 660 CDD TM_EGFR-like 288 318 - -
Pste1g03428 660 SMART serkin_6 348 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03428 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Pste1g03428 660 ProSitePatterns Protein kinases ATP-binding region signature. 354 375 IPR017441 GO:0005524
Pste1g03428 660 CDD STKc_IRAK 354 618 - -
Pste1g03428 660 Pfam Legume lectin domain 24 259 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03428 Pste-Chr1 15932947 15934929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03428 21 567 Receptor kinase-like Gene Family AT4G04960 61.121 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste1g03428 Pkinase 1.2e-44 CL0016