Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03425 ATGAATTGTGGGTTAGATTCAAGCGTCTATGAAGGGAAGTTTTCATCTTTACTTTTGAATAGAAAAACAAAGAAGGTACTGTGTAGTGGCATGGGTTGCTTATGTTCTAAGAGTTCAGCGGTAGAGGACAGCAATAAAGGTGTCACTAAGAAATTTCAATCGTATAACACAAGGTCCTCTGAATTGAATGTTTTGCGGTTGAATTCGACCAGGAGGGTTGATGAGGGTAGGGTGAAAGATGTGTTAATAGATGGTGGACAAGTGAAAGATTCATTTATTGACAAGAAGGCCAATGGTTCTGGGCAATTGTATGTGGATCATGAAGTAAAGAAGAAATTACAGAAGCCAGAATTGACTGTTGTGGATCATATTGGCCCCGGAAGGGTTCCAAAGGCTATAGAAGGAGAGCAAGTAGCAGCAGGTTGGCCTGCATGGCTGTCTTCTGTTGCCGGTGAAGCTATCAAGGGATGGATACCACGGAGAGCAAATACGTTTGAGAGGTTACATAAAATCGGGCAAGGAACTTACAGTACTGTTTATAAGGCACGGGATGTGATTAACCAAAAGTTTGTTGCATTGAAGAAAGTGCGCTTTGACAATCTTGATCCTGAGAGTGTCAAGTTTATGGCAAGGGAAATCCATGTTCTGCGTAGGCTTGACCATCCAAACATAATAAAATTGGACGGGTTGATAACATCACCGATGTCTCGCAGCTTGTACCTCGTTTTTGAGTATATGGAGCATGATCTTACAGGACTTGCATCAAATCCTGACATTAAGTTCTCTGAACCGCAGCTCAAATGTTACATCCAGCAACTTCTTAGTGGATTGGATCATTGCCATAGTCATGGTATCCTCCACCGTGACATAAAGGGCTCAAATCTTCTCATTGACAATAATGGAGTCTTGAAGATTGCTGATTTTGGTTTGGCGAGTTTTTTTGACCCCCACCACAGTGTTCCATTGACAAGCCGAGTAGTAACTCTATGGTATAGACCCCCAGAACTTTTACTCGGAGCAAATCATTATGGGGTTGCAGTTGATTTGTGGAGCACTGGTTGCATACTGGGTGAACTATATACTGGAAGGCCCATTTTGCCAGGAAAAACGGAGGTTGAGCAGTTGCATCGGATTTTTAAACTATGTGGCTCACCGTCTGATGACTATTGGCTTAAATTGCGGTTGTCGCATTCAACAGTATTCAGACCACCACACCATTATAGGCGTTGTGTTACAGAGACATTTAAGGACTACCCATCTACTGCCGTAAAGCTTATAGAGACCCTACTTTCTGTAGAGCCAGCACTAAGAGGGACTGCAGCAGCTGCTCTGAAAAGTGAGTTCTTTACATCAGAGCCTCTGCCTTGTGATCCATCAAGTTTACCGAAATATGCCCCTAGCAAAGAGATTGATGCCAAATTACGGGACGAAGCTAGAAGGCTTGTCAGCTTGCTTTCTGCATTGCATCACTTGATTCACGTCACGCATTCATGCTGGAAGGGTGTCTTGCAAGGAGCTGTTGGAGGTAGGGAGCAAAAAGGCACCTTAGGAGTTAGACAAGAAAGAGGACATAGGGCTAATGCCACAGCAAAAGACAATTCTGATCCGAGCTTCTCAGTGCAGCAAGGACGTTATTCCAGCTCAAGGAATGGAAGTGAATTATCCAACCCTCATAGGGGACCTGTGTCTGGAATTCTGGCTTTCCCACGCAAACAACCAGAAGATGTTAAAGGAATGGATAATAATTTATCTGGGCATCTGTATAAGAGGCCTTCACATTCAGGCCCGTTGGTTCCTGGTTCTGTCTGGGCAAAAGGTGGGAATGAAGTTGATGATATGCCTCCTGTTTCAAATAGAGGGAACCTATCAAAACTATCCGGGCTAGTGGCATCTAGGACTGTGTCTGAAGATCAGGAGGATAAACCAGTTCACTTGCACCACAGAAAACCAATTGAAGTAAGAAAATCCGTGGAGTCAACTAATGGATCAGAGTCAAGAAGAAGGCAGGATCAAAAACGAATTGCTGATCTCAATCAAATTGAAAGCAGAAGGGTCCCAGCTGAAAAATCAACTCCGGTTAGTTTCTTATTTCCTTTTTTGCTTTGTTATTCTAAATATTTTGAGGGTTAG 2130 0.4324 MNCGLDSSVYEGKFSSLLLNRKTKKVLCSGMGCLCSKSSAVEDSNKGVTKKFQSYNTRSSELNVLRLNSTRRVDEGRVKDVLIDGGQVKDSFIDKKANGSGQLYVDHEVKKKLQKPELTVVDHIGPGRVPKAIEGEQVAAGWPAWLSSVAGEAIKGWIPRRANTFERLHKIGQGTYSTVYKARDVINQKFVALKKVRFDNLDPESVKFMAREIHVLRRLDHPNIIKLDGLITSPMSRSLYLVFEYMEHDLTGLASNPDIKFSEPQLKCYIQQLLSGLDHCHSHGILHRDIKGSNLLIDNNGVLKIADFGLASFFDPHHSVPLTSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTEVEQLHRIFKLCGSPSDDYWLKLRLSHSTVFRPPHHYRRCVTETFKDYPSTAVKLIETLLSVEPALRGTAAAALKSEFFTSEPLPCDPSSLPKYAPSKEIDAKLRDEARRLVSLLSALHHLIHVTHSCWKGVLQGAVGGREQKGTLGVRQERGHRANATAKDNSDPSFSVQQGRYSSSRNGSELSNPHRGPVSGILAFPRKQPEDVKGMDNNLSGHLYKRPSHSGPLVPGSVWAKGGNEVDDMPPVSNRGNLSKLSGLVASRTVSEDQEDKPVHLHHRKPIEVRKSVESTNGSESRRRQDQKRIADLNQIESRRVPAEKSTPVSFLFPFLLCYSKYFEG 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03425 709 FunFam probable serine/threonine-protein kinase At1g54610 152 247 - -
Pste1g03425 709 SUPERFAMILY Protein kinase-like (PK-like) 159 457 IPR011009 -
Pste1g03425 709 Gene3D Transferase(Phosphotransferase) domain 1 248 485 - -
Pste1g03425 709 MobiDBLite consensus disorder prediction 514 581 - -
Pste1g03425 709 SMART serkin_6 165 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03425 709 ProSiteProfiles Protein kinase domain profile. 165 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03425 709 ProSitePatterns Protein kinases ATP-binding region signature. 171 194 IPR017441 GO:0005524
Pste1g03425 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Pste1g03425 709 MobiDBLite consensus disorder prediction 515 529 - -
Pste1g03425 709 MobiDBLite consensus disorder prediction 530 557 - -
Pste1g03425 709 Pfam Protein kinase domain 165 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03425 709 Gene3D Phosphorylase Kinase; domain 1 152 247 - -
Pste1g03425 709 CDD STKc_CDK9_like 165 449 - -
Pste1g03425 709 PANTHER CELL DIVISION PROTEIN KINASE 163 455 - -
Pste1g03425 709 FunFam probable serine/threonine-protein kinase At1g54610 248 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03425 Pste-Chr1 15921762 15926700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03425 157 480 Core Cell Cycle Gene Families AT5G10270 48.235 4.42e-107 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pste1g03425 Pkinase 4.7e-68 CL0016