Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03416 AAAAGAAAAAAACTGAAAATATGGGCTTGAAAAGCATATGTTGTATCATTGAAGTGACGACTTTCACAGTAGTTTTTATTACAAGCCGATTTGTCTTATCTGATAATGTGCCAATTCCCGCTGACAAGGGAAAAGTAGAAGAATGGTTTAAAACTAACGTTGGTCCTTTAGATAAAAGAAAAAGCAGTTTGGACCCTGCATTAGTGACGGCTGAAGCCTCTCCTAAGGTTATAAAAGTAATGAAAGATGGTAGTGGAGAATTTAAAACCATCACGGATGCCCTTAAAAGCATACCTTCGGGGAACACCAAGCGTACAATTTTGTACATTGGAGCTGGAACTTATGAAGAGAAAATCAAAGTTGATGCGTCAAAGCCTTTCGTCACCCTTTATGGAGCACCAGGAAATATGCCAAACTTGACCTTTGGGGGCACTGCAGCACAATATGGCACTGTCGATAGTGCTACATTAATTGTTGAATCTAATTATTTTGTGGCAGCTAACATCAACATCGCGAACACTGCAGCGAGACCAGATGGGAAAAAAACAGGAGCCCAAGCAGTAGCGTTACGAATTTCTGGTGACAAAGCAGCATTTTATAATTGCAAAATGTATGGATTCCAAGACACAGTGTGTGATGATAGGCATAGACATTTTTTCAAGGATTGCTTAATTCAAGGCACCGTGGATTATATTTTCGGAAGTGGGAAGTCACTATATTTGAAAACTGAGCTAAGAACAATTGCTGAATCCTGGACTACATTTATAACAGCACAAGCAAGAAAAGGTGATGATGAGGACGATGGCTACTCATTTGTACATTGTGATGTTACTGGAAGTGCAAAGGGAACTTTCTTGGGCAGAGCATGGTTTTCTCATCCCAGAGTGGTCTTCGCTTATAGCACCATGAGTGACATGGTGGATAAAAAAGGCTGGAGTAATAACAATCACCCAGAACATGACAAAACTGCATTTTTTGGAGAGTTTAAAAACCAAGGACAGTGCAGGATCCCAAGGCGTGCTCCTATTACTAGGCAGCTTACTGAAGAAACAGTTAAACCGTTCATAAGCCTAGAGATGATTGAGGGTTCCAAATGGTTACTTCCTCCTCCAACTGTATAACTAGCTTTCATGTCTTATAATATATTGTGTTAAACATGTAATATTTTGCTTCAAATTTAGTTTCAAATTAAAGTGAGGTCAGTGTAAACTTAGATTAGTTGATACACAAGTGGTGTATCCGTTTAGGCGTCCATGCACACTATCGTGATCGACAACCTTGGTACAATTGACTAGAATCTTGGGATTGTTGTTACTTTAAACTTTTGTGATGAC 1334 0.3921 MGLKSICCIIEVTTFTVVFITSRFVLSDNVPIPADKGKVEEWFKTNVGPLDKRKSSLDPALVTAEASPKVIKVMKDGSGEFKTITDALKSIPSGNTKRTILYIGAGTYEEKIKVDASKPFVTLYGAPGNMPNLTFGGTAAQYGTVDSATLIVESNYFVAANINIANTAARPDGKKTGAQAVALRISGDKAAFYNCKMYGFQDTVCDDRHRHFFKDCLIQGTVDYIFGSGKSLYLKTELRTIAESWTTFITAQARKGDDEDDGYSFVHCDVTGSAKGTFLGRAWFSHPRVVFAYSTMSDMVDKKGWSNNNHPEHDKTAFFGEFKNQGQCRIPRRAPITRQLTEETVKPFISLEMIEGSKWLLPPPTV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03416 366 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Pste1g03416 366 FunFam Pectinesterase 66 362 - -
Pste1g03416 366 Gene3D - 65 362 IPR012334 -
Pste1g03416 366 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 63 360 - -
Pste1g03416 366 Pfam Pectinesterase 71 328 IPR000070 GO:0030599|GO:0042545
Pste1g03416 366 SUPERFAMILY Pectin lyase-like 65 361 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03416 Pste-Chr1 15839146 15840868 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03416 1 366 Carbohydrate Esterase AT1G69940 52.589 1.16e-141 404