Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03396 AATCGAAGAAACAATTCCGAAAAGAAAAAAACTGGAAATATGGGCTTGAAAAGTATATGTTGTATCATTGAAGTGACTTTCACAGTAGTTTTTATTACAAGCCGATTTGTCTTATCTGATAATGTGCCAATTCCTGCTGACAAGGGAAAAGTAGAAGAATGGTTTAAAACTAACAAAAGCAGTTTGGACCCTGCATTAGTGACGGCTGAAGCCTCTCCTAAGGTTATAAAAGTAATGAAAGATGGTAGTGGAGAATTTAAAACTATCACGGATGCCCTTAAAAGCATACCTTCTGGGAACACCAAGCGTACAATTTTGTACATTGGAGCTGGAACTTATGAAGAGAAAATCAAAGTTGATGCGTCAAAGCCTTTCGTCACCCTTTATGGAGCACCAGGAAATATGCCAAACTTGACCTTTGGGGGCACTGCAGCACAATATGGCACTGTCGATAGTGCTACATTAATTGTTGAATCTAATTATTTTGTGGCAGCTAACATCAACATCGCGAACACTGCAGCGAGACCAGATGGGAAAAAAACAGGAGCCCAAGCAGTAGCGTTACGAATTTCTGGTGACAAAGCAGCATTTTATAATTGCAAAATGTATGGATTCCAAGACACAGTGTGTGATGATAGGCATAGACATTTTTTCAAGGATTGCTTAATTCAAGGCACCGTGGATTATATTTTCGGAAGTGGGAAGTCACTATATTTGAAAACCGAGCTAAGAACAATTGCTGAATCCTGGACTACATTTATAACAGCACAAGCAAGAAAAGGTGATGATGAGGACGATGGCTACTCATTTGTACATTGTGACTGCAAAGGAACTTTCTTGGGCAGAGCATGGTTTTCTCATCCCAGAGTGATATTCGCTTATAGCACCATGAGTGATATGGTGGATAAAAAAGGCTGGAGTAATAACAATCACCCAGAACATGACAAGACCAGTGCGGATCCTCAAGGGCGTGCTCCTATTACTAGGCAGCTTACTGAAGAAACAGTTAAACCTTTCATAAGCCTAGAGATGATTGAGGGTTCCAAATGGTTACTTCCTCCTCCAACTGTATAA 1074 0.4013 NRRNNSEKKKTGNMGLKSICCIIEVTFTVVFITSRFVLSDNVPIPADKGKVEEWFKTNKSSLDPALVTAEASPKVIKVMKDGSGEFKTITDALKSIPSGNTKRTILYIGAGTYEEKIKVDASKPFVTLYGAPGNMPNLTFGGTAAQYGTVDSATLIVESNYFVAANINIANTAARPDGKKTGAQAVALRISGDKAAFYNCKMYGFQDTVCDDRHRHFFKDCLIQGTVDYIFGSGKSLYLKTELRTIAESWTTFITAQARKGDDEDDGYSFVHCDCKGTFLGRAWFSHPRVIFAYSTMSDMVDKKGWSNNNHPEHDKTSADPQGRAPITRQLTEETVKPFISLEMIEGSKWLLPPPTV 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03396 357 ProSitePatterns Pectinesterase signature 2. 223 232 IPR033131 -
Pste1g03396 357 Gene3D - 29 340 IPR012334 -
Pste1g03396 357 MobiDBLite consensus disorder prediction 305 326 - -
Pste1g03396 357 SUPERFAMILY Pectin lyase-like 70 352 IPR011050 -
Pste1g03396 357 MobiDBLite consensus disorder prediction 306 320 - -
Pste1g03396 357 Pfam Pectinesterase 76 310 IPR000070 GO:0030599|GO:0042545
Pste1g03396 357 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 68 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03396 Pste-Chr1 15676555 15678077 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03396 14 357 Carbohydrate Esterase AT1G69940 49.041 2.42e-126 365