Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03387 GAAAAGAAAAAAAACTGGAAATATGGGCTTGAAAAGTATATGTTGTATCATTGAAGTGACTTTCACAGTAGTTTTTATTACAAGCCGATTTGTCTTATCTGATAATGTGCCAATTCCTGCTGACAAGGGAAAAGTAGAAGAATGGTTTAAAACTAACGTTGGTCCTTTAGATGAAAGAAAAAGCAGTTTGGACCCTGCATTAGTGACGGCTGAAGCCTCTCCTAAGGTTATAAAAGTAATGAAAGATGGTAGTGGAGAATTTAAAACTATCACGGATGCCCTTAAAAGCATACCTTCTGGGAACACCAAGCGTACAATTTTGTACATTGGAGCTGGAACTTATGAAGAGAAAATCAAAGTTGATGCGTCAAAGCCTTTCGTCACCCTTTATGGAGCACCAGGAAATATGCCAAACTTGACCTTTGGGGGCACTGCAGCACAATATGGCACTGTCGATAGTGCTACATTAATTGTTGAATCTAATTATTTTGTGGCAGCTAACATCAACATCGCGAACACTGCAGCGAGACCAGATGGGAAAAAAACAGGAGCCCAAGCAGTAGCGTTACGAATTTCTGGTGACAAAGCAGCATTTTATAATTGCAAAATGTATGGATTCCAAGACACAAAAACCGAGCTAAGAACAATTGCTGAATCCTGGACTACATTTATAACAGCACAAGCAAGAAAAGGTGATGATGAGGACGATGGCTACTCATTTGTACATTGTGACGTTACTGGAAGTGCAAAGGGAACTTTCTTGGGCAGAGCATGGTTTTCTCATCCCAGAGTGATATTCGCTTATAGCACCATGAGTGATATGGTGGATAAAAAAGGCTGGAGTAATAACAATCACCCAGAACATGACAAAACTGCATTTTTTGGAGAGTTTAAAAACCAAGGACCAGGTGCAGATCCTCAAGGGCGTGCTCCTATTACTAGGCAGCTTACTGAAGAAACAGTTAAACCTTTCATAAGCCTAGAGATGATTGAGGGTTCCAAATGGTTACTTCCTCCTCCAACTGTATAACTAGCTTTCATGTCTTATAATATATTGTGTTAAACATGTAATATTTTGTTTCAAATTTAGTTTCAAATTAAAGTGAGGTCGGTGTAAACTTAGATTAGTCGATACACAAGTGGTGTATTCGTTTAGGCGTCCATGCACACTATCGTGATCGACAACCTTGGTACAATTGACTAGAATCTTGGGATTGTTGTTACTTTAAACTTTTGTGATGACATATTCAAATCAATATGTCTATGTATATACATGCCAAAGGGAAATGT 1290 0.386 MGLKSICCIIEVTFTVVFITSRFVLSDNVPIPADKGKVEEWFKTNVGPLDERKSSLDPALVTAEASPKVIKVMKDGSGEFKTITDALKSIPSGNTKRTILYIGAGTYEEKIKVDASKPFVTLYGAPGNMPNLTFGGTAAQYGTVDSATLIVESNYFVAANINIANTAARPDGKKTGAQAVALRISGDKAAFYNCKMYGFQDTKTELRTIAESWTTFITAQARKGDDEDDGYSFVHCDVTGSAKGTFLGRAWFSHPRVIFAYSTMSDMVDKKGWSNNNHPEHDKTAFFGEFKNQGPGADPQGRAPITRQLTEETVKPFISLEMIEGSKWLLPPPTV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03387 335 Gene3D - 204 332 IPR012334 -
Pste1g03387 335 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 62 202 - -
Pste1g03387 335 SUPERFAMILY Pectin lyase-like 64 330 IPR011050 -
Pste1g03387 335 Gene3D - 29 203 IPR012334 -
Pste1g03387 335 Pfam Pectinesterase 70 202 IPR000070 GO:0030599|GO:0042545
Pste1g03387 335 Pfam Pectinesterase 212 325 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03387 Pste-Chr1 15617035 15618804 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03387 1 335 Carbohydrate Esterase AT1G69940 47.541 1.06e-119 347