Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03380 ATGAGTGGTGTCGGTGGTGGTTGCCCCTGCCCAAGGGGTAGTAGTGAGTGTTCCATGGAGGATCTCAATGGTGATACGGTCGGAAATTTGAATCAGAATACTGGAAAACCTCCAAGGGACCTTTCGGTTAATCGTCATTCCATCAGCTCTTCTTGGTCTGAATCGGAATCAAATATGAACATTATTGGATTTAAATCAAGCACAGAAGAAAAATCAGACTTTTCACTTGTGTTGCGATCTGGAAGCTGTTCTGATAAAGGGCCAAAGCAGTATATGGAGGATGAATTCATATGTGTTGATATTCTCAGTGAATGTGTGGGTCCAGGAGCAAATCTTCCTTCTCCTGCAGCATTTTATGGGGTATTTGATGGACATGGCGGTGTTGATGCAGCGTCATTTACGAGAAAGAACATGCTCAATTTTATAGCTGAAGATGCTCATTTCCCAGCTGGCATTAAGAAAGCAGTTAAGTGTGCATTTGTGAAGGCTGATCTTGCATTTAGAGATGCTATTACTCTAGATAATTCTTCAGGCACCACCGCTCTAATAGCCCTTATGTTGGGAAGGGCCGTGTTAATTGCCAATGCAGGAGATTCTCGTGCTGTGTTGGGCAAACGGGGCAGAGCCATTGAACTTTCTAAAGACCATAAGCCAAATTGCACATCTGAAAGATTAAGAATTGAGAAACTGGGTGGTGTCATATATGATGGATACCTGAATGGCCAACTATCAGTGGCTCGTGCTCTTGGAGATTGGCACATCAAAGGTTCCAAAGGTTCCAAGAGCCCCTTGAGCGCGGAGCCAGAGCTGGAGGAGATTGTCCTTACAGAAGAGGATGAGTTTTTGATAATGGGTTGTGATGGATTATGGGATGTGATGAGTAGCCAATGTGCAGTTACAATGGTGAGAAGGGAACTCATGCAGCATAATGATCCCACAACATGTGCAAAAGTACTCGTTGCTGAGGCACTCCAACGCAACACATGTGACAATCTGACAGTTGTGGTTGTGTGTTTCTCCAAAGATCCACCTCCTAAAATTGAAATTCCTAGATCATATAGGAGGAGGAGTATTTCTGCAGAGGGCCTTGATCTTCTCAAGGGTGTCTTGAGTGGTAGATGA 1122 0.4421 MSGVGGGCPCPRGSSECSMEDLNGDTVGNLNQNTGKPPRDLSVNRHSISSSWSESESNMNIIGFKSSTEEKSDFSLVLRSGSCSDKGPKQYMEDEFICVDILSECVGPGANLPSPAAFYGVFDGHGGVDAASFTRKNMLNFIAEDAHFPAGIKKAVKCAFVKADLAFRDAITLDNSSGTTALIALMLGRAVLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSAEPELEEIVLTEEDEFLIMGCDGLWDVMSSQCAVTMVRRELMQHNDPTTCAKVLVAEALQRNTCDNLTVVVVCFSKDPPPKIEIPRSYRRRSISAEGLDLLKGVLSGR 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03380 373 SMART PP2C_4 69 337 IPR001932 -
Pste1g03380 373 Gene3D - 63 343 IPR036457 -
Pste1g03380 373 Pfam Protein phosphatase 2C 81 331 IPR001932 -
Pste1g03380 373 SUPERFAMILY PP2C-like 73 340 IPR036457 -
Pste1g03380 373 SMART PP2C_SIG_2 102 339 IPR001932 -
Pste1g03380 373 ProSiteProfiles PPM-type phosphatase domain profile. 79 339 IPR001932 -
Pste1g03380 373 FunFam Probable protein phosphatase 2C 22 64 342 - -
Pste1g03380 373 CDD PP2Cc 79 339 IPR001932 -
Pste1g03380 373 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Pste1g03380 373 PANTHER PROTEIN PHOSPHATASE 2C 66 337 IPR015655 GO:0004722|GO:0006470
Pste1g03380 373 MobiDBLite consensus disorder prediction 21 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03380 Pste-Chr1 15580777 15582893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03380 62 371 PP2C-type Phosphatase Gene Family AT3G51470 76.774 1.53e-173 484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03380 1 15580777 15582893 Pste1g03380 1 15580777 15582893 ECH