Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03376 GAAAAGAAAAAAACTGGAAATATGGGCTTGAAAAGTATATGTTGTATCATTGAAGTGACTTTCACAGTAGTTTTTATTACAAGCCGATTTGTCTTATCTGATAATGTGCCAATTCCTGCTGACAAGGGAAAAGTAGAAGAATGGTTTAAAACTAACGTTGGTCCTTTAGATGAAAGAAAAGCAGTTTGGACCCTGCATTAGTGACGGCTGAAGCCTCTCCTAAGGTTATAAAAGTAATGAAAGATGGTAGTGGAGAATTTAAAACTATCACGGATGCCCTTAAAAGCATACCTTCTGGGAACACCAAGCGTACAATTTTGTACATTGGAGCTGGAACTTATGAAGAGAAAATCAAAGTTGATGCGTCAAAGCCTTTCGTCACCCTTTATGGAGCACCAGGAAATATGCCAAACTTGACCTTTGGGGGCACTGCAGCACAATATGGCACTGTCGATAGTGCTACATTAATTGTTGAATCTAATTATTTTGTGGCAGCTAACATCAACATCGCGCGAGACCAGATGGGAAAAACAGGAGCCCAAGCAGTAGCGTTACGAATTTCTGGTGACAAAGCAGCATTTTATAATTGCAAAATGTATGGATTCCAAGACACAAAAACCGAGCTAAGAACAATTGCTGAATCCTGGACTACATTTATAACAGCACAAGCAAGAAAAGGTGATGATGAGGACGATGGCTACTCATTTGTACATTGTGACGTTACTGGAAGTGCAAAGGAACTTTCTTGGGCAGAGCATGGTTTTCTCATCCCAGAAACTGCATTTTTTGGAGAGTTTAAAAACCAAGGACCAGGTGCGGATCCTCAAGGGCGTGCTTCTATTACTAGGCGACTTCATCAAGAAACAGCTTAAACCTTTCATAAGCCTAGAGATGATTGAGGGTTCCAAATGGTTACTTCCTCCTCCAACTGTATAACTAGCTTTCATGTCTTATAATATATTGTGTTAAACATGTAATATTTTGTTTCAAATTTAGTTTCAAATTAAAGTGAGGTCGGTGTAAACTTAGATTAGTTGATACACAAGTGGTGTATTCGTTTAGGCGTCCATGCACACTATCGTGATCGACAATCTTGGTACAATTGACTAGAATCTTGGGATTGTTGTTACTTTAAACTTTTGTGATGAC 1149 0.389 MKDGSGEFKTITDALKSIPSGNTKRTILYIGAGTYEEKIKVDASKPFVTLYGAPGNMPNLTFGGTAAQYGTVDSATLIVESNYFVAANINIARDQMGKTGAQAVALRISGDKAAFYNCKMYGFQDTKTELRTIAESWTTFITAQARKGDDEDDGYSFVHCDVTGSAKELSWAEHGFLIPETAFFGEFKNQGPGADPQGRASITRRLHQETA 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03376 211 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 126 - -
Pste1g03376 211 SUPERFAMILY Pectin lyase-like 2 204 IPR011050 -
Pste1g03376 211 Gene3D - 1 127 IPR012334 -
Pste1g03376 211 Pfam Pectinesterase 2 126 IPR000070 GO:0030599|GO:0042545
Pste1g03376 211 Gene3D - 128 211 IPR012334 -
Pste1g03376 211 MobiDBLite consensus disorder prediction 188 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03376 Pste-Chr1 15563464 15565182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03376 6 211 Carbohydrate Esterase AT1G69940 39.925 9.45e-56 179