Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03372 ATGGCAAATAATAGTGGAAAGTCTTGCAAGGAGGGTGTTGAAGAGACCCATCACAAGGTGATTGGTGAAAGTGAAGACCTAGACTGGGAGAAAGAGAAGGGAAAGGGACTTGATTTGAGCTCTGGGAGGAGACAATGGAAGCCAGTTTTTGATGATGCTTCTGTGTCTCATAGGCCTCACAAGAAAATCCGCAGCCCTGAACGTGAAAACGCAAATCAACAACAACCATCCTCTTTGCTCTCTCTTCAGCCCCCTTCATCAAGAATAGTGTTTCCTTTTGCTTTTGAAGGCTCACAACATCCAATGCCATTCCCACACCCTTTTGGAACCACAAACTTGCCTCTTTTTCGTCCAGCTCTTCAGCCAACTCAACAAATGATATCATTTGTGCACCAACAGAACATGGGGTATCCACCATTTCTAGCACCAGAATCTACCATTCCACACCAGCATCAACAACAGCTCCAACAACAGCAGCAACAGCTTCTTCAGTATTGGAGTGATGCACTGAATTTGAGTCCAAGAGGGAGGATGATGATGATGATGAATAGGACTGAAGGAAGGCCAATGTTAAGGCCCCAAGCACAGCCTTTGAATGCTACCAAGCTCTATAGGGGAGTGAGGCAACGCCATTGGGGCAAATGGGTCGCTGAAATTCGTCTTCCACGCAATAGAACTCGTCTCTGGCTTGGAACATTTGACACTGCTGAAGATGCTGCTATGGCTTATGATCGCGAAGCCTTCAAGCTTAGAGGGGAAAATGCCAAGCTCAATTTTCCTGAACTCTTTCTCAACAAAGATAAAGCAGAAACATCTACAACTGCTCATGCTTCTTCTTCAAATGAAGGTTCAACATCAACATCAAGCCAGAACACAAAGCAACCTGACCCAATTCCAGAAGAGACCAACACTGAGAGTGAGGACATGCCACCAACAGAGACAATAGTAGAAGAAAATGCTGAAGCTGGAGAAGGAATTTCACAGCCACAGGAATTGGTTTGGGGTGAATGGTTCAATGCAATTCCTGCAGGTTGGGGTCCTGGAAGTCCTGTGTGGGATGACTTAGACCCCAACAATAATCTTCTTTTGCATTCACAACTTCCCTTTGTGAGTCCAAATCAGCAAGAGTTCAATAATGCCAGTGCTTCTACTCAGACGCAAGAAGAAGATAACACAACAGAACCAGGTTCTTCCTCTCTCTCTTGTCCCATGAGGCCCTTCTTCTGA 1227 0.4548 MANNSGKSCKEGVEETHHKVIGESEDLDWEKEKGKGLDLSSGRRQWKPVFDDASVSHRPHKKIRSPERENANQQQPSSLLSLQPPSSRIVFPFAFEGSQHPMPFPHPFGTTNLPLFRPALQPTQQMISFVHQQNMGYPPFLAPESTIPHQHQQQLQQQQQQLLQYWSDALNLSPRGRMMMMMNRTEGRPMLRPQAQPLNATKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENAKLNFPELFLNKDKAETSTTAHASSSNEGSTSTSSQNTKQPDPIPEETNTESEDMPPTETIVEENAEAGEGISQPQELVWGEWFNAIPAGWGPGSPVWDDLDPNNNLLLHSQLPFVSPNQQEFNNASASTQTQEEDNTTEPGSSSLSCPMRPFF 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03372 408 CDD AP2 202 262 IPR001471 GO:0003700|GO:0006355
Pste1g03372 408 MobiDBLite consensus disorder prediction 373 408 - -
Pste1g03372 408 MobiDBLite consensus disorder prediction 1 84 - -
Pste1g03372 408 MobiDBLite consensus disorder prediction 270 311 - -
Pste1g03372 408 MobiDBLite consensus disorder prediction 270 299 - -
Pste1g03372 408 MobiDBLite consensus disorder prediction 373 400 - -
Pste1g03372 408 SMART rav1_2 203 266 IPR001471 GO:0003700|GO:0006355
Pste1g03372 408 MobiDBLite consensus disorder prediction 50 68 - -
Pste1g03372 408 Gene3D AP2/ERF domain 203 261 IPR036955 GO:0003700|GO:0006355
Pste1g03372 408 MobiDBLite consensus disorder prediction 69 84 - -
Pste1g03372 408 SUPERFAMILY DNA-binding domain 203 261 IPR016177 GO:0003677
Pste1g03372 408 PRINTS Ethylene responsive element binding protein signature 226 242 IPR001471 GO:0003700|GO:0006355
Pste1g03372 408 PRINTS Ethylene responsive element binding protein signature 204 215 IPR001471 GO:0003700|GO:0006355
Pste1g03372 408 FunFam Ethylene-responsive transcription factor 2 202 261 - -
Pste1g03372 408 ProSiteProfiles AP2/ERF domain profile. 203 260 IPR001471 GO:0003700|GO:0006355
Pste1g03372 408 MobiDBLite consensus disorder prediction 10 40 - -
Pste1g03372 408 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 28 355 - -
Pste1g03372 408 Pfam AP2 domain 204 252 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03372 Pste-Chr1 15544422 15545648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03372 25 356 AP2-EREBP Transcription Factor Family AT4G28140 43.109 1.41e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pste1g03372 AP2 2.6e-13 CL0081