Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03366 GCAGCCTTTTCCCTCTGTCATCATCATTCTTATTATTCACGAACTTTTATCTCTCCCTCTCTTCCTCACTACACACCACTTTCAATTTTTCTAACTTTTCCTTCCACCCATTTGTATTTTTTCACCAAGTTTCAAGCTTTCCTGTTTTTCAACCACACCCTTCTTCTCCTTTTCACTGATTCAGAGTTTATGCTTTGCCTCTTCATACTTTTTTGCTCCGAGTCCTCTCACCACTCACTGAGGATACAATTACTATCTAAGAGGTCTAAAGGCATTGCAGGGAACAAACTTCAAAGGGATATAATCATACAAAAAGAAAGACAAGACCAGAAAGTTTAATGAAGTAAGACATGGAAGATGAAATTGAGGCCATGAGAGTCTTTTAGTAGACCCTCTGTCTGTATGGGAGGCTTATTACAATTTTTTGAATTCAATCAAAGGAGGATGGCGAAGAAAGTCCTTGCTCGTAAGAGACATCATGGTGGCCTGGAAGCTCCTCGGAACAGTCTTGATCTGCAGGTACGAACACCTCAGAACTACTGTCCAGAAGGTGAATTACCATACAATTATCATGTAGAAGAAGAGGGCAGGTCTGAGAGTAATCGTTATTCAAATGTGGGTTCAATGAAAAAACTGATAAATGAGGAGCTATCCAAACAATCAAGCATCAGAAAAAATGCACCAAGCCTTGTGGCAAGGTTGATGGGAATAGAAACAATGCCATTAGACACTAAATATGTTGTTCCATCCGATAAAAGAATAAATGAAAACACAGGGAAGAGGTCTTCTTTAGACAAAGGAATGAATCAAAGGGGTTCAATTAGTTGGGGTTCTTCCAACTTTAATTCTTCTAGCCAGATGTATTTTGATTCATTATATGAAGATATAGATGATGATGACGGATGGAATAAGAGTTTCGGAGAACCAAGGCCACGGGAACATCCTCAGGAAGAGGAGCTACAGAAATTCAAGAAAGAGTTTGAAGCTTATCAAGCAGCAAGGTTTCTGGAGTGTTCAAAGGTTGCTGAAATAGGCAGTGTTCCTAGACAATTGCTTGCACAAGAAAACCTGAATAAGGAAAAGGTGACACACAATGATTTTGTTTTACAAAGAGAAACACCAGGGAAAGTTGCAGATCTTGACAGCAATTCATTCAGAACTACACCACCTGACAGTTATGGTTTAGAATGTCATGGTAACATGATGGAGTTAATCCCAGCTATGCAAAGGAAATCCTTTCCTCCAAGGAGCAGAACACTAAGCAGAGACTTTGAGGAGTCCTTAATGATGAAATCTTGCAACAGAATAGACACGTCTTCTTCTCCCACTAGGATTGTTATCTTGAAGCCTGGTCCTGATAGCATCTGCAACCATGAAGAGAATTGGACCATTTCATCAGGAACTATACAAGGGAGAAATAGTATAGAAGATTTTCTTGAAGAGGTGAAAGAGCGTTTGAAATGTGAACTGCAAGGGAAAGTTGTCAAAAGGGGTTCTGCGATTCGAGGGAGTGGAATTGAGACACCTTACAATGAAAAATCATCCAATCCTAAACTAATAGCTCGTCATATAGTAAAGCAAGTAAGAGAAAGTGTGACTAGAGATACCAACACAAATTTACTCTGCTCAGAATCAACAGGGTCATACAAAAGTGAAATGCAGTTCAATGGATCAAATTCCCCAGAATTTACCAGCAGAGATACTCAGAAGTTCTTGTCAGAAAGGCTAAGAAATAATGTAGTTAGAAGTGAAGCACGATATGACATTCTTGAGGGAAAATCGAGGTCACTTGCATTAGAAAACCATAAAGCTAGACTAAAGCAAACAGAGGACATTATGAAGTATCCAGGTAACTGGGAAATTTCCAAAGAGGACACAGAAATACTACCAGGATCTTTCAGGCATGAACTGGATGAGAATATATTGCTCCACAAGGAGTTGTCCCCCAGAAACCTTGTTAGATCCTTGTCTGCTCCTGTATCACGATCAGGAACATCATTTGGGAAGCTTCTTCTAGAGGACCGCCACATTTTAACCGGTGCTCATATTCGGAGGAAGCTTGAAGCTGTTGAAACTATGACTGTGGATGACAAAAAAAGGAAGAAAGATAGATTTAATATTAAAGAAAGAGTCTTCAGTTTTAGATATAGTCTTGCTTTAAGAGGGAGGCTTTTTGGCAGAAGGGTTCAATCAATGGTAGAATCACATGGCAATGAATATGGTCCCATGGTGAGAGATGTCACTAGTGGACCAACAGTTCTCATGAACTGTGGTAAGAGACATGAGAACTCCACTGAGGTACCTCCTAGTCCTGCATCAGTGTGCAGCAGTGTTCATGAAGACTTTTGGAGGCGAGCAGAATATTTAAGTCCAACATCAACTCCTGATGTGTCTTCAAGAGATGATAATGTTGTGCCCCAGCTTTTCAGAGATATCAGCTCTGGTTTGAATGAGCTAAGGAGACAACTCAATCAACTTGAATCTGATGGCTCGGAGGACTTCACTATGAAACAGGAACCTGCCGAGTCTGACTTAGACCAATTAGAGGATCCAGCTGAATCTTACATAAGAGATCTACTTGTTGCTTCTGGTCTGTACTTTGGTTCATGGGATAAATCTTTATTAAGAGGGGACACATTTGCAAAGCCTATTAGCAACTCTGTTTATGCAGAAGTGGAAGAATCTCACAAGAAATTGGTCAAGGAAAATGATGAAAGATGTATCAAGGATCAGAATGAGAATAAGCTAGAGCACAAAGTTTTGCTTGATTTGTTAAACGAGGCACTTTCAGTTGTTTTTGGACCTCCTTTGACATTATCTAGATTCAGAAGGAAAGTAAGCAACTCTTCCATGTTGCTACCCCCTTCTGGAAAGGAACTGTTGAACTTAGTGTGGGACATTATCCGTGTTTCATTGTACCCTCCATCTGACATATCTACATATTCACTTGATACTTTAGTGGCTCAACACCTAGGATCCATCCCTTGGTCTGGATTAATAAATGATGAGATCAATATTTTGGAAAGAGATATAGAATGTCTAATAACTGATGGTTTGGTTGAAGAACTCATAAAGGATATGTTCTGAGATGTAGTGAGAAGTACCATTATGACAATAAAGAATTCTGCACACGGAGCAAGGCTTATACATGATTACTGAAATTGGAAGATAACCAGCTAATAATGGAATACCGCATGAATGTGTGTATATATGGTAGTCGGTGTGAGTGTTTGTTATATATAGGGGTTTGAGTTGCGGTAATACATACTGTACATGAGTGGCATGAGTTTCTAGGTTTATTTTTTGGCAAAGCAGAAAATTGATTGATGATTGTAG 3336 0.3945 MGGLLQFFEFNQRRMAKKVLARKRHHGGLEAPRNSLDLQVRTPQNYCPEGELPYNYHVEEEGRSESNRYSNVGSMKKLINEELSKQSSIRKNAPSLVARLMGIETMPLDTKYVVPSDKRINENTGKRSSLDKGMNQRGSISWGSSNFNSSSQMYFDSLYEDIDDDDGWNKSFGEPRPREHPQEEELQKFKKEFEAYQAARFLECSKVAEIGSVPRQLLAQENLNKEKVTHNDFVLQRETPGKVADLDSNSFRTTPPDSYGLECHGNMMELIPAMQRKSFPPRSRTLSRDFEESLMMKSCNRIDTSSSPTRIVILKPGPDSICNHEENWTISSGTIQGRNSIEDFLEEVKERLKCELQGKVVKRGSAIRGSGIETPYNEKSSNPKLIARHIVKQVRESVTRDTNTNLLCSESTGSYKSEMQFNGSNSPEFTSRDTQKFLSERLRNNVVRSEARYDILEGKSRSLALENHKARLKQTEDIMKYPGNWEISKEDTEILPGSFRHELDENILLHKELSPRNLVRSLSAPVSRSGTSFGKLLLEDRHILTGAHIRRKLEAVETMTVDDKKRKKDRFNIKERVFSFRYSLALRGRLFGRRVQSMVESHGNEYGPMVRDVTSGPTVLMNCGKRHENSTEVPPSPASVCSSVHEDFWRRAEYLSPTSTPDVSSRDDNVVPQLFRDISSGLNELRRQLNQLESDGSEDFTMKQEPAESDLDQLEDPAESYIRDLLVASGLYFGSWDKSLLRGDTFAKPISNSVYAEVEESHKKLVKENDERCIKDQNENKLEHKVLLDLLNEALSVVFGPPLTLSRFRRKVSNSSMLLPPSGKELLNLVWDIIRVSLYPPSDISTYSLDTLVAQHLGSIPWSGLINDEINILERDIECLITDGLVEELIKDMF 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03366 894 Coils Coil 439 459 - -
Pste1g03366 894 Coils Coil 675 695 - -
Pste1g03366 894 Pfam Domain of unknown function (DUF4378) 720 888 IPR025486 -
Pste1g03366 894 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 893 - -
Pste1g03366 894 Pfam DUF761-associated sequence motif 93 107 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03366 Pste-Chr1 15511691 15517740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03366 75 893 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 39.344 9.44e-142 436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03366 1 15511691 15517740 Pste1g03366 1 15511691 15517740 ECH
Pste1g03366 1 15511691 15517740 Pste7g01950 7 17787553 17790666 PCT