Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03359 GGTTTGAGCAAGGAGGATGAAGAGGCATTGGTTGGGCAAGTTGAAATATGGAAGTACATGACATGCTTCACCGACTCTGTGGCCTTAAAATGTGTCATAGAACTGCGCATAGCGGACATAATCGACCGCTATGCTAAACCACTGTCCTTGTCTCAAATTGTAGAGAACATAGAAGATGCACCCTCCCCAGATGCCTCTCTTCTCCACAGAATCATGAGAGTGATGATTCGTAGAAAGATCTTCAGTGCAGAAAAATCAGATACAGGAGAAACCCTTTATGGCTTGACACGTGCTTCAAAGTGGATCCTCCGTGACACAAAAATGACCCTAGCACCCATGTTGCTGCTGGAGAACCACCCAATTCACCTCAACCCTGCTCACTACATCACTGACATTATCAAAGAAGGAACTAAAAATGGCACTGCTTTCTTCAGGTGCCATGGCCATGAGCAATTTGAAATGACAGGTTTGGACCCTGAGTATAACAGGTTGTTCAACGAGGGAATGGTGTGCACTGCTAGGGTTGTGTCCAAGGCTGTCATCACTGGCTACAGCGATGGGTTCAACAAGATCGAGTCATTGGTTGATGTGGGAGGTGGCATTGGAGGCTCTCTCTTTGAGATTGTTAGGGCTTACCCTCACATCAAAGCCATCAACTTTGACTTGCCTCATGTGGTTACCACTGCACCTAACTATCATGGAATCACCCATGTTGGAGGTGACATGTTTGTGTCCATTCCCAGTGCTGATGCTATTTACATGAAGTGGATTCTGCATGACTGGAGCGACGAGCACTGCATCAAGATTCTGACAAACTGTAGGAAGGCAATACCAGAGAAGACAGGAAAAATGATAATTGTGGATCATGTGCTGCGACCTGAAGAAAACGAACTCTTCACTGATGTTGGCATTGCATTTGACATGATGCTTCTCGCACACAACGCTGGTGGCAAAGAGAGAACTGAAGAGAATTGGAAGTGGCTTTTCAAAGAAACAGGTTTCGCCCGTTACAACATCATCAAGATCAACGCTCTCCCTTCCATCATTGAAGCATTTCCAATCTAA 1065 0.4563 GLSKEDEEALVGQVEIWKYMTCFTDSVALKCVIELRIADIIDRYAKPLSLSQIVENIEDAPSPDASLLHRIMRVMIRRKIFSAEKSDTGETLYGLTRASKWILRDTKMTLAPMLLLENHPIHLNPAHYITDIIKEGTKNGTAFFRCHGHEQFEMTGLDPEYNRLFNEGMVCTARVVSKAVITGYSDGFNKIESLVDVGGGIGGSLFEIVRAYPHIKAINFDLPHVVTTAPNYHGITHVGGDMFVSIPSADAIYMKWILHDWSDEHCIKILTNCRKAIPEKTGKMIIVDHVLRPEENELFTDVGIAFDMMLLAHNAGGKERTEENWKWLFKETGFARYNIIKINALPSIIEAFPI 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03359 354 Pfam Dimerisation domain 28 75 IPR012967 GO:0046983
Pste1g03359 354 Pfam O-methyltransferase domain 128 335 IPR001077 GO:0008171
Pste1g03359 354 SUPERFAMILY "Winged helix" DNA-binding domain 7 105 IPR036390 -
Pste1g03359 354 PIRSF O-mtase 2 354 IPR016461 GO:0008168
Pste1g03359 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 353 IPR016461 GO:0008168
Pste1g03359 354 PANTHER O-METHYLTRANSFERASE 13 336 IPR016461 GO:0008168
Pste1g03359 354 FunFam O-methyltransferase family protein 104 352 - -
Pste1g03359 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 351 IPR029063 -
Pste1g03359 354 Gene3D - 2 102 IPR036388 -
Pste1g03359 354 Gene3D Vaccinia Virus protein VP39 104 354 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03359 Pste-Chr1 15463856 15465077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03359 27 340 Monolignol Biosynthesis Gene Families AT5G54160 38.629 2.63e-76 237