Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03348 GAAATGAGAAATGAGAAATGAGAACGCGAGGCGAACACGGCAAAGATGGATATAAAAAAGGGTCAAAGACAATAGACGCTAGTGTTATTTAAGCACTCTAGTTTGTTTCTCATCCTGAACAACATGGGTGTCTGCTTTACTTCTCCGGCTGGTCACCAATCCCGAGGTTCAGGGGGCGTGAAAGGAAAGTGTAAAATATCGGAGGAGATTAGGATTATTGAAAGCGGTGTTGTTAACGGAGGAGGAGGAAGGTGCTGCAACAGCAATAGCATTGTGTTTGGGAGTGTGAAAGGGAAGTTGAAGGAGTTTAATTTTTGGGATCTGAAAGCTGCGGCCAAGGGATTCAAGTGGGATACATTGGTCGGTGAGGGAGGTTTTGGCAAAGTTTATAAAGGATGGTTGGACACCAAGACATTAGCACCCACCAAGGCTGGTTCTGGAATGATGGTGGCCATCAAGAAATTGAATCCAGAAAGTACCCAGGGCCTTCTCGAGTGGCAGTCCGAAATCAACTTTTTAGGAATGATTTCTCACCCAAACCTGGTCAAGCTATTGGGTTATTGTTGTCACGATGAGGAATTTCTCCTTGTGTACGAATTCATGCCAAAGGGGAGCTTGGAGAATCATATGTTTTGGAGAAATACTAACACAGAACCACTCTCTTGGGACACCCGACTCAAAATAGCTATTGGTGCTGCACGGGGTTTGGCTTTCTTGCACACCCAAGAAAGGCAAATCATATACAGAGATTTCAAAGCCTCCAATATACTTCTTGATGCGGATTACAACGCAAAAATTTCAGATTTTGGGTTGGCGAAATTAGGGCCTTCTGGTGGAGATTCACACGTGAGTACCAGGATCATGGGAACATATGGCTATGCTGCTCCTGAATACATTGCAACAGGCCACTTGTATGTGAAAAGTGATGTTTATGGTTTCGGTGTAGTGCTGCTAGAAATGCTGACAGGGTTGCGGGTATTTGATAGATGCCGCCCCATAGAGCAGCAGAATTTAGTTGAATGGACTAAGCCTTTTCTCTCCAATAAAAACAAGTTGAAAAGCATTATGGATGAGAGGATAGAGGGTCAGTATTCAATCAAGGCAGCAATGAAAGCAGCACAGCTTACTCTAAAATGCATTGAATATGACCCTAAAAAACGCCCTCCTATGAAAGAAATTCAGGACGCATTGGAACGCATTGAAGCTATCAAGGTTAGAACGACGCAAAGCAAGAAACACTGCTAACTAAATTAAGTTTGCAGCCAGGAACAATTTTCAATAGCTAATTTGTCATCCTTATGTTCAGCATGCAGTGCTTGCTAACACATACTGCCAAGGTATGAAATGAAACGTAAATTCACTAGAAACTTAGCTTGAATTGTAACATAATCCAACAGATAATACACGTATTTTTCAAACTTTTTTTTTTTTATAAGCATGTATTTTTCATAGTTATTTTGGGGGAAATTGTGAGAGACATTTGATGGCTCTGTAATTTTATCTTCCCGGTTGGAATTAATTAATTTTATTTTCAAATATTACAAATGTACCAATTTAGCCTCACTTGATACTCTTCCATATTAATAAGTGATAGAGTATCTTAGAGTTTATGCGATATGGTGAAAACATTT 1631 0.4053 MGVCFTSPAGHQSRGSGGVKGKCKISEEIRIIESGVVNGGGGRCCNSNSIVFGSVKGKLKEFNFWDLKAAAKGFKWDTLVGEGGFGKVYKGWLDTKTLAPTKAGSGMMVAIKKLNPESTQGLLEWQSEINFLGMISHPNLVKLLGYCCHDEEFLLVYEFMPKGSLENHMFWRNTNTEPLSWDTRLKIAIGAARGLAFLHTQERQIIYRDFKASNILLDADYNAKISDFGLAKLGPSGGDSHVSTRIMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMLTGLRVFDRCRPIEQQNLVEWTKPFLSNKNKLKSIMDERIEGQYSIKAAMKAAQLTLKCIEYDPKKRPPMKEIQDALERIEAIKVRTTQSKKHC 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03348 373 MobiDBLite consensus disorder prediction 1 20 - -
Pste1g03348 373 PANTHER OS01G0588500 PROTEIN-RELATED 56 360 - -
Pste1g03348 373 Pfam Protein tyrosine and serine/threonine kinase 77 356 IPR001245 GO:0004672|GO:0006468
Pste1g03348 373 FunFam Serine/threonine-protein kinase PBS1 160 373 - -
Pste1g03348 373 SUPERFAMILY Protein kinase-like (PK-like) 58 356 IPR011009 -
Pste1g03348 373 Gene3D Transferase(Phosphotransferase) domain 1 160 372 - -
Pste1g03348 373 FunFam Serine/threonine-protein kinase BIK1 46 159 - -
Pste1g03348 373 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03348 373 CDD STKc_IRAK 80 359 - -
Pste1g03348 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Pste1g03348 373 ProSitePatterns Protein kinases ATP-binding region signature. 80 113 IPR017441 GO:0005524
Pste1g03348 373 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03348 Pste-Chr1 15409555 15415782 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03348 62 356 Glycoside Hydrolase AT3G07070 47.635 6.23e-96 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste1g03348 PK_Tyr_Ser-Thr 1.6e-47 CL0016