Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03317 TGTCAAGTTAACCAGTGTAGTGTAGTGTAGTATAGTGTAGACCACCCACTCCCTCCTATATTACATAACCTTGCATTTCACTACATGCCCTTCTTCTAGTGCTTATTATCTTTGTGGGGTGTCTCTTCTTCTTTCTTTGTTCTTGCATCAACAATGGTCTTATCCGATGAGAACACTTCTAGACCAATCAACCCCACAATTTTTCAAGGAGGGAAGGAGTGTGTGGGAAACAGAAAGGTGGGGCAGAACAGAAGGGCCTTGAGCGTGATCAATCAGGATCTGGTGGTGGAAGGGAGACCTTACCCTTGTGTTGTTAACAAGAGAGCATTGGCAGGAAAAAATGATGTATGTGAGAAGAAGCAGGCGGATCCGGCGCATCGACCCATCACAAGGCGTTTTGCTGCACAAATTGCTAGCACGCAGCAAAATAATCGTGTTGAGGGAACCAAGAAGTCAAACTTGGGTAATTTAAATTCAAATGGATTTGGAGCGAGTATATTTGTGGATGAGGAACACAAGGAAACGGATGACCAGCCAGTGCCCATGTCTTTAGAGCAGACAGAACCAATGCATAGTGGACCAGATCAGATGGAGGAAGTTGAGATGGAGGATATAAATGAAGAGACTGTATTGGACATTGATATCGGTGATGCAAATAATCCCCTTGCAGTCGTGGACTATATTGAAGATCTTTATGCCTACTACAGAAAAACGGAGGGTATTAGCTGTGTCTCACCCAATTACATGGCACAACAATTTGACATTAATGAAAGGATGAGGGCTATACTGATTGACTGGCTTATTGAGGTGCACGACAAATTTGACCTCATGCACGAGACATTGTTTCTTACTATTAACCTCATAGATCGATTTTTGGCAAAGCAGACAGTGGTAAGAAAGAAGCTTCAGTTGGTTGGTCTAGTTGCCATGCTTTTGGCATGCAAATATGAAGAAGTTGCGGTACCTGTGGTGGGGGATCTAATTCTCATATCAGACAAGGCATACACGAGGAAGGAAGTTCTGGAAATGGAGAAATTGATGGTCAATACTTTGCAGTTTAACATGTCTGTGCCAACAGCATATGTTTTTATGAAAAGATTCCTAAAGGCAGCTCAAGCAGACAGAAAGCTTGAGCTACTCGCTTTCTTCCTAGTGGAACTGTCTCTAGTAGAATATGAGATGCTGAAGTTCTCTCCATCTCTGCTAGCAGCAGCTGCTGTCTACACAGCACAATGTACTATTTATGGTTTCAAACAATGGAGTAAGACAAGCGAATGGCACTCCAATTACTCAGAAGATCAGCTATTAGAGTGCTCTACATTAATGGTTGAATTTCATAAGAAGGCTGGGAATGGGAAACTTACTGGGGTACATAGGAAGTACTGCTCATCTAAATTCAGCTATACTGCAAAATATGAGCCAGCACGTTTTCTTCTGGAGAACCCATTGTAGCAGGCCTTGTATAGTCACTAACATCATGATATATACTTGACTTTTATAATTGGGGGGCCATATATGGGTTAAGATGTGCATGCACATTAGCAAACTTGGGTTGCACTTATATTGTTCGGGGATTATGAAATCCTCTGATGTGTTTGTTTTTACGTATTTGTTCTGATGTTATTTTTCCACCCTTTACTCTTTTCTGTGTTATGTTCTAAGAGAACAGAACATACTTCGTCCATTTGAGTCTGTATTTCTCTTGTTCCCATTGAACAAAATAATGGAAACGATGTCATAGAAAGAAACAATTTCACACCGGCAATGCTACACTAAGTCATGCAGTTGAGCGTATACTTATTGATGCAGTTTAAAACTAAACAGCTATTCATTTTTTAT 1839 0.4095 MVLSDENTSRPINPTIFQGGKECVGNRKVGQNRRALSVINQDLVVEGRPYPCVVNKRALAGKNDVCEKKQADPAHRPITRRFAAQIASTQQNNRVEGTKKSNLGNLNSNGFGASIFVDEEHKETDDQPVPMSLEQTEPMHSGPDQMEEVEMEDINEETVLDIDIGDANNPLAVVDYIEDLYAYYRKTEGISCVSPNYMAQQFDINERMRAILIDWLIEVHDKFDLMHETLFLTINLIDRFLAKQTVVRKKLQLVGLVAMLLACKYEEVAVPVVGDLILISDKAYTRKEVLEMEKLMVNTLQFNMSVPTAYVFMKRFLKAAQADRKLELLAFFLVELSLVEYEMLKFSPSLLAAAAVYTAQCTIYGFKQWSKTSEWHSNYSEDQLLECSTLMVEFHKKAGNGKLTGVHRKYCSSKFSYTAKYEPARFLLENPL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03317 432 PANTHER CYCLINS 132 397 IPR039361 -
Pste1g03317 432 SUPERFAMILY Cyclin-like 306 424 IPR036915 -
Pste1g03317 432 CDD CYCLIN_AtCycB-like_rpt1 156 302 - -
Pste1g03317 432 ProSitePatterns Cyclins signature. 209 240 IPR006671 -
Pste1g03317 432 FunFam G2/mitotic-specific cyclin-1 294 419 - -
Pste1g03317 432 Gene3D - 193 305 - -
Pste1g03317 432 CDD CYCLIN_AtCycB-like_rpt2 307 423 - -
Pste1g03317 432 Pfam Cyclin, N-terminal domain 179 305 IPR006671 -
Pste1g03317 432 PIRSF Cyclin_A_B_D_E 21 432 IPR046965 GO:0016538|GO:0044772
Pste1g03317 432 SMART Cyclin_C_2 307 424 IPR004367 -
Pste1g03317 432 SMART cyclin_7 311 393 IPR013763 -
Pste1g03317 432 SMART cyclin_7 214 298 IPR013763 -
Pste1g03317 432 SUPERFAMILY Cyclin-like 168 304 IPR036915 -
Pste1g03317 432 Pfam Cyclin, C-terminal domain 307 420 IPR004367 -
Pste1g03317 432 Gene3D - 179 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03317 Pste-Chr1 15215981 15219492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03317 1 428 Core Cell Cycle Gene Families AT1G20610 58.945 6.80e-175 494