Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03316 CTCCTCCAACAATTCTAATTATTAATTATTCTTAGTACAATCTCAAAACAAATTCTCAGCATTTGCCAACCTTGTTCTGCTCCCCACTTAAATTTTCTGCAAGTTGGTTATTTGGATTTATTGAGGTGGTGATAATAGCTTCAGGGGAGTTGACCTGGTTGTTCTTCGGTTTGGATGATGCTTCTTTGATTGGGTTCACTGAGAGGAGTGTGCTCAAGATTAAGATCAATGGGTTGGAAGAGATCTGCTTTGGAATGCGAGAGAGTGAAGATCTATGGACAAGTTCTATTGGGATTTTTGTTGATCTGCAGAATTCAGACTTCATTTGCAGTTACTGATCCCACTGACGTTGCTGCAATTAATAGCTTATATATCGCACTGGGATCCCCTGTTCTCCCTGGGTGGGTTCCCAGTGGAGGAGATCCATGTGGAGAAGGGTGGCAAGGCATTCAGTGTAATGGATCATTCATACAAAAAATAGTTCTAAATGCCGCAAATTTGGGAGGAGAACTGGGTGATAAACTGTCAACTTTTGTTTCGATCTCTGTAATTGACCTAAGCAACAACAACATTGGAGGAAATATTCCATCCAATTTGCCAGCTACCTTGAGAAACTTTTTTCTTTCAGCCAACCAGTTCACTGGAAGCATTCCGACCTCCTTATCCACTTTGACTGGACTGACAGACATGTCTCTTAACAACAACTTTTTAACTGGAGAAATACCAGATGCTTTTCAGTCACTTACGCAATTGATCAATCTGGATTTATCTCATAATAATTTGAGTGGGGAATTGCCTCCTTCTATGGATAACTTGTCATCTTTGACTACCCTACGCTTACAGAACAATCAACTGTCTGGAACACTTGATGTTTTACAAGACCTTCCTTTGAAAGATTTGAATGTTGAGAACAACCAGTTTGCTGGCCCAATACCTCCAAAGTTGCTAAGCATCCCTACCTTCAGACAAGCTGGAAATCCATTTAATGTTAATGGCACTACAACTCCTGCTTCTTCACCCCGCTCCCCAGCGATAGCACCACCAGGAACTCCTGTTTCTGGGGCACCGCCATCTTCTGGCCGTGTACCTACTAAACAGGCTGATGGACCAACTGCAGCAAATGAATCACAGTCTGGGAAATCCCAAAAATCCACCAAAAGGGTGGTTTGGATATCTATTGCTAGTGTGTTGGGATTCATTATTTTGTTACTAGCATTCATTCTCTTTATTCCAAGATGTAGCAGAAGAGAACGAGTTGATAGGTCCAAGCGACATCAAATTGGTGCATATGGGGGTGAAAGACAAAATGCTAGGGATTATGGGGCCTTAGTCCAACCACCCAGTCAAGTGGAAAAAGGCAAATTAATATACCTTGTTCCTGTAAGGGATGTTCCAAGACCAAAAGAGGATCATCAAGTTCGAGAAGAGACCTGGGTAATTGGGGTTAATCCAAATCCACAGGGTGAGCAAGAGAAGGATGTACAAAGAAAGGCAACAACACCTAAGATAAGAGATCATGAGATAGATATCAGTACACTAGAAGTATATTCAATGCCCCTCCTCCCTCCCTCCCTCCCTCCACCTCCACCTCCACCCCCACCTCCACCTCCACCACCACCAACTGCTACTGAGAAGGTGATTGTTGAGCCAATCGCATCTCACAGGGGGACTAATGTCAATCCTCCAATAAGAAGTTCAGTTCCCCCTCCCACTTCTGCAAAATTTTTTGCCATTGCATCCCTTCAACAGTATACAAATAGCTTTTCCCAAGAAAATCTTATAGGAGGAGGCATGCTGGGTAATGTGTATAGAGCAGAGCTTCCTAATGGCAAGTTACTTGCTGTAAAGAAACTGGACAAGAGAGCCTCTGAGCACCAGAAGGATGATGAATTTCTTGAATTGATAAATAGTATTGACAGATTAAAGCATCCAAATGTTGTTGAGCTTGTTGGATACTGTTCAGAGCATGGTCAAAGGCTTCTGATCTATGAGCACTGCAGTAATGGGTCACTCTATGATGCACTCCACGCAGACGATGACTTCAAAACAAAACTCTCATGGAATGCTCGTATTCGGATAGCACTTGGGGCAGCTAGAGCCTTAGAATATCTGCATGAGTTATGTCAGCCACCTGTAGTACATAGAAATTTGAAGTCTGCCAATATTCTCCTTGATGACGATCTCTCTGTGCAAGTCTCTGATTGTGGTTTAGCCCCATTAATAGCTTCGGGATCAGTCAGTCAGCTCTCGGGAAACCTGTTAACTGCTTATGGCTACGGAGCTCCTGAATTTGAATCTGGAATTTACACATACCAAAGTGACGTGTATAGCTTTGGAGTGATTATGTTAGAACTTTTGACTGGCCGGCAGTCCCATGATAGGACACGACCACGAGGGGAGCAATTTCTGGTCAGATGGGCAGTTCCCCAACTTCATGATATTGATGCGTTATCTAGCATGGTTGATCCTTCGTTAAAGGGAAATTACCCTGCAAAATCATTGTCAAATTTTGCAGACATTATCTCTAGATGCCTTCAGTCTGAGCCAGAATTTAGGCCAGCAATGTCCGAGGTCGTTCTATACTTGCTAAATATGATAAGGAGGGAATCTCAACAAAGTGAAGCAAATGAAAAATGAGAATGTTAGTGATATTTGTTTGTGAATTAATCGTATTGTGCAGAGATTCACTTTCTGAAATATCTACCTGTAGAGATATCATCTCATCTGAGAGCAGCCCGATTAGTAGTCTCCATGGTTCATTATTTCCAGCTAACCCATTCAGCATTCACATACGTTCTACCATGAGTTTTGTCCAATCAACTTAAGAGAATTCAGAATTGTAGTGACCAACAGTCGTGTGTCTTATCATGTCCGTTAACTACAAAGTTGATTAAACCATGTCATGTTAATTGTAGAGTGCTTATAACTAACCCATTTGTTTGATAATTGTTTCCAAATTCTTGATAATGATGTAATTCTGTTGTGGCATTTTCCTGGTCTTTAGGTTCATCCTTCATAATTTTATTGATCATTTGTACCAAATCACAGACAAGCATTGTAATTTGTATTTATTGTTTTTTGGACACTACAAAAAGATATATCTATTCCTTGTTTAGTGCCC 3121 0.414 MGWKRSALECERVKIYGQVLLGFLLICRIQTSFAVTDPTDVAAINSLYIALGSPVLPGWVPSGGDPCGEGWQGIQCNGSFIQKIVLNAANLGGELGDKLSTFVSISVIDLSNNNIGGNIPSNLPATLRNFFLSANQFTGSIPTSLSTLTGLTDMSLNNNFLTGEIPDAFQSLTQLINLDLSHNNLSGELPPSMDNLSSLTTLRLQNNQLSGTLDVLQDLPLKDLNVENNQFAGPIPPKLLSIPTFRQAGNPFNVNGTTTPASSPRSPAIAPPGTPVSGAPPSSGRVPTKQADGPTAANESQSGKSQKSTKRVVWISIASVLGFIILLLAFILFIPRCSRRERVDRSKRHQIGAYGGERQNARDYGALVQPPSQVEKGKLIYLVPVRDVPRPKEDHQVREETWVIGVNPNPQGEQEKDVQRKATTPKIRDHEIDISTLEVYSMPLLPPSLPPPPPPPPPPPPPPPTATEKVIVEPIASHRGTNVNPPIRSSVPPPTSAKFFAIASLQQYTNSFSQENLIGGGMLGNVYRAELPNGKLLAVKKLDKRASEHQKDDEFLELINSIDRLKHPNVVELVGYCSEHGQRLLIYEHCSNGSLYDALHADDDFKTKLSWNARIRIALGAARALEYLHELCQPPVVHRNLKSANILLDDDLSVQVSDCGLAPLIASGSVSQLSGNLLTAYGYGAPEFESGIYTYQSDVYSFGVIMLELLTGRQSHDRTRPRGEQFLVRWAVPQLHDIDALSSMVDPSLKGNYPAKSLSNFADIISRCLQSEPEFRPAMSEVVLYLLNMIRRESQQSEANEK 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03316 802 Gene3D Transferase(Phosphotransferase) domain 1 590 802 - -
Pste1g03316 802 MobiDBLite consensus disorder prediction 442 467 - -
Pste1g03316 802 ProSiteProfiles Leucine-rich repeat profile. 198 220 IPR001611 GO:0005515
Pste1g03316 802 SUPERFAMILY Protein kinase-like (PK-like) 489 786 IPR011009 -
Pste1g03316 802 SUPERFAMILY Formin homology 2 domain (FH2 domain) 454 461 - -
Pste1g03316 802 Gene3D Phosphorylase Kinase; domain 1 487 589 - -
Pste1g03316 802 MobiDBLite consensus disorder prediction 444 467 - -
Pste1g03316 802 Pfam Protein tyrosine and serine/threonine kinase 515 784 IPR001245 GO:0004672|GO:0006468
Pste1g03316 802 MobiDBLite consensus disorder prediction 250 305 - -
Pste1g03316 802 MobiDBLite consensus disorder prediction 250 264 - -
Pste1g03316 802 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 81 783 - -
Pste1g03316 802 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 37 264 - -
Pste1g03316 802 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 478 589 - -
Pste1g03316 802 SUPERFAMILY L domain-like 64 243 - -
Pste1g03316 802 Gene3D Ribonuclease Inhibitor 41 258 IPR032675 -
Pste1g03316 802 ProSiteProfiles Protein kinase domain profile. 512 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03316 802 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 590 800 - -
Pste1g03316 802 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03316 Pste-Chr1 15211344 15220523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03316 32 797 Strubbelig Receptor Gene Family AT4G03390 61.125 0.0 873
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pste1g03316 PK_Tyr_Ser-Thr 2.7e-43 CL0016