Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03313 ATGCTCATGGATGATATCAGCATGAAGTGTAGAGCTTTGGCAGAGGGAAAGCAATGGTACTACTACAGCAGAAGGATACAAAATAGGGTTACTGAAAATGGTTATTGGATGCCAATGGGAATGGAAGAGCCAGTGGTTTCAAGCTCAAGCAACAAGAGAGTTGGCATGAAGAAATATTATGTGTTCCATGTTGGAGAAGCTCCTGATGGTAACATAACCAATTGGATAATGCAAGAGTATCACCTATTAGATTCTGCTTCCTCTAGCAGATCAACCAGAAGAAGAGCACAACCAAAACCGGAACATAGTAAATGGGTGATATGTCGAGTTTATGAACGCGATGATGATGATGATGGGGATGGAACAGAGCTCTCTTGTTTGGATGAAGTTTTCTTATCATTGGATGATCTTGATGAAATAAGTTTGCCAAATTAGATTATGCAAGTGATCTAGTTAGTTGCATTGCATTATATATCCAAATGGATATATTAATTTAGA 498 0.3835 MLMDDISMKCRALAEGKQWYYYSRRIQNRVTENGYWMPMGMEEPVVSSSSNKRVGMKKYYVFHVGEAPDGNITNWIMQEYHLLDSASSSRSTRRRAQPKPEHSKWVICRVYERDDDDDGDGTELSCLDEVFLSLDDLDEISLPN 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03313 144 Pfam No apical meristem (NAM) protein 14 82 IPR003441 GO:0003677|GO:0006355
Pste1g03313 144 PANTHER NAC TRANSCRIPTION FACTOR 56 15 117 - -
Pste1g03313 144 ProSiteProfiles NAC domain profile. 1 113 IPR003441 GO:0003677|GO:0006355
Pste1g03313 144 Gene3D NAC domain 4 117 IPR036093 GO:0003677|GO:0006355
Pste1g03313 144 SUPERFAMILY NAC domain 13 112 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03313 Pste-Chr1 15189042 15190920 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03313 3 113 NAC Transcription Factor Family AT3G15500 36.134 1.13e-19 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste1g03313 NAM 7.8e-11 No_clan