Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03292 TCAACGCCACGTGGTAGGATCCAACAACTATGTCTGAACTTGAAACAGCAACACTTGAGAGTTCAAAGCTGTGAACTTGAAGCTACTAATCCAAATTCTTGTAACCATGACGATTGGTTTCTTCTCCATCTGGACCTCCAGGCTTCTCAAATCCTCCAACTTTCTGCTTCTCTGCGCTCTCAGGTTGGTGGTGGTGTAGTGGCATACTCAGAATCACAATCAGGAGCTCAGCGTCCTAGTGTTGAGGCTAATGAGCCCTCCAAAAAGAAAGTGGTGGTTCTTGGAACAGGATGGGCTGCTACCAGTTTCCTTAAGGATCTGGACGCTACGTTATATGATGTTGACGTTGTTTCACCGCGTAACTATTTTGCATTTACTCCCTTGTTACCGAGTGTCACTTGTGGAACAGTTGAAGCACGGAGCATTGTAGAGCCAGTTCGAAACATCATTAAAAAGAGAAAAGGAGAAGTGAACTTTTGGGAGGCAGAATGTGTCAAGATTGATTCTGCAAACAGAAAAGTCTTTTGTCGGTCCAATATAGACAATTTGGTGGGAAGTGGCGAGTTTTCGTTGGACTATGACTTCTTAGTTGTAGCAGTAGGAGCACAAGTCAATACTTTTAACACCCCCGGTGTCAAGGAGAACTGTCATTTTCTGAAGAATGTTGAAGATGCTCAGAAGATTAGACTGTCTGTGATTGATTGCTTTGAGAAGGCTGTTCTTCCTAGTCTATCTGACACTGAGCGAAGGTCAAATCTTCATTTTGTAGTTGTTGGAGGAGGCCCAACTGGTGTGGAATTTGCAGCAGAGCTGCATGATTATGTCCACGAAGATTTAATAAAGTTATATCCAAGTGTTAACGATAAAGTGAAAATAACACTGATTCAATCAGGAGATCACATCTTGAACATGTTTGATGAAAGAATAAGTTCCTTTGCTGAGCAAAAGTTTACAAGAGATGGGATAGAAGTTCAAACAGGATGTCGAGTTGTCAGTGTTAATGACAAGGATATTACAGTGAAGGTGAAATCAACGGGTAAGGTTTGCTCGGTGCCCCATGGGTTGATTGTCTGGTCAACAGGCATTTCAACTCTTCCAGTTATAAGGGACTTCATGGACGAAATTGGTCAGGCTAAAAGGCATGTACTGGAAACTGATGAATGGTTGCGAGTGAAGGAATGTGAAGGTGTGTACGCCATTGGTGATTGTTCTAGCATCACTCAACGTAAAATCATGGATGATATCACAGCCATATTTGAGGCTGCAGACAAAAATAAATCGAGCACCTTAACTATTGAAGAATTTGAGGATGTGATGGATGACATTATCTTAAGATATCCTCAAGTTGAGCATTATCTAAAGCAGAAACATTTGCGTGATTTTACCACTCTATGGAAAGATTTACAAGGGAATGAAAGCAAGGAAATAGACATTGAAGCATTTAAGCTTGCCCTTTCTAATGCAGATTCACAGGTGAAGAGTCTGCCAGCAACTGCACAGGTTGCTGCCCAACAGGGTACATATCTAGCTAGATGCTTTAACCGCAGGGATCATGCTGAAGAGAATCCTGAAGGTCCTCGACGATTTAGTGGATTTGGACGTCATAAGTTTCTTCCCTTCCGGTATAAGCATTTGGGGCAATTTGCTCCATTGGGTGGGGAGCAGGCAGCTGCAGAACTTCCTGGAGACTGGGTTTCCATGGGTCACAGCACTCAATGGCTTTGGTATTCTCAAGCAAGTGAGCTGGCGAACAAGGGTGTTGGTGGTGTCAGATTGGACAAGAAGATTCATATTTGGCAGGGATTCAAGTCGAGTTTAATGTGGCACTTTATGTCTGGTGGGGGTTTAGTGGCATATTGTGATGCGAAACCAGAATATGGTAATGAAATTCCAAAAAAGAAGGTGGTGGTGCTGGGAACTGGTTGGGCTGGAACAAGTTTTTTGAAAAATATGAAAAGCGACTCGTATGAAATTCATGTGGTTTCGCCACGTAACTATTTTGCATTCACTCCATTGCTACCAAGTGTCACGTGTGGCACAGTGGAAGCAAGGAGCATCGTTGAACCCATTCGCAGCATTACTAGGAAGAGTGGTGTAAATATACATTTCAGTGAAGCTGAATGCTATAAGATCGACAACAAGAACAACAGAGTTTATTGCCAAACTAGTAAAGACAAAAAGATGGGCATCCAAGAAGAATTTTCCCTTGATTATGATTACCTTGTAATAGCAATGGGAGGTCGTTCTAATACCTTCAACACACCTGGTGTTCAGGAACATGCTTATTTCTTGAAGGAAGTGGATGAAGCTCTAAAGATTCGTCAGACAGTGGTTGACCTTTTTGAGAGAGCTAGCCTTCCTTCTATACCAGTGGAAGAAAAGAAAAAACTTCTGAGTTTTGTAGTTGTTGGTGGTGGTCCAACTGGGGTAGAGTTTTCTGCAGAGCTTCATGACTTTGTACACGAGGATATGGCTAAGTTATATCCTGCCCTTAAAGACTATGTGAAGATTACTCTCCTGGAGGCAGGCGATCATATCTTAAACATGTTTGACAAGAGAATTACAGAATTTGCTGAACATAAGTTTGCCAGAGATGGCATTGATGTGAGATTGGGATCTATGGTTGTCAAGGTTAGTGAAAACGAAATCACTGCCAAAGAAAGGGCAACTGGTCAAGTTGTTTCTATACCTCATGGAATGGTAGTTTGGTCAACTGGTATTGGTGCTCGTCCTGAACTAGTTGAATTTATGAAGCAGATTGGCCAGGTTAACAGACGTGCATTGGTTACTGATGAATGGCTAAGGTTGGAAGGATCTGACAACATCTATGCTCTAGGGGATTGTGCTACTATAAATCAACGCAAAGTTATGGAAGATATAGCTGCGATATTTAGCAAGTCTGACAAGAGCAATTCTGGAAAATTAGATCTTAAAGAATTTAAAAACGTTGTTGGCGACATTATTGAGAGGTACCCACAAGTGGAAATTTATTTAAAGAAGAACCAAATGAGAGATATGAATACCTTGCTACAGAAATCTCAAGATAGCAATATTGTAGTGGACATTGAATACTTCAAACAAGCCCTTTCCAAAGTAGATTCTCAGATGAAAAATCTTCCCGCAACGGCTCAGGTAGCTGCACAACAAGGAGTCTATCTTGCAGACTGTTTCAACCGCATGGAGTTGTGTGAGAGGTATCCAGAAGGCCCTCTCAGGTTCAGAGGAGTTGGACGCCATCGGTTCCGTCCCTTCAGGTACAAGCATTTGGGACAATTTGCTCCTCTAGGAGGAGAGCAAACTGCAGCCCAGCTGCCAGGAGATTGGATTTCAATTGGTCAGAGTACCCAATGGCTATGGTATTCGGTGTATACAAGCAAACAAGTGAGCTGGAGGACAAGGTTTTTGGTGGTTGGTGACTGGGGTAGGCGATACACATTTGGTAGGGACTCAAGCAAAATCTAAGATCTCATTGAAAAAGCTACTTCATATAATTTTTGGTACAACAGAGCAAGTGATCCCAACTCTACCTAAGTGCCCAACAAAAGAAAGAAAGAAAATAGGTGTTTAATTTCATGCAGCT 3580 0.4218 STPRGRIQQLCLNLKQQHLRVQSCELEATNPNSCNHDDWFLLHLDLQASQILQLSASLRSQVGGGVVAYSESQSGAQRPSVEANEPSKKKVVVLGTGWAATSFLKDLDATLYDVDVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEVNFWEAECVKIDSANRKVFCRSNIDNLVGSGEFSLDYDFLVVAVGAQVNTFNTPGVKENCHFLKNVEDAQKIRLSVIDCFEKAVLPSLSDTERRSNLHFVVVGGGPTGVEFAAELHDYVHEDLIKLYPSVNDKVKITLIQSGDHILNMFDERISSFAEQKFTRDGIEVQTGCRVVSVNDKDITVKVKSTGKVCSVPHGLIVWSTGISTLPVIRDFMDEIGQAKRHVLETDEWLRVKECEGVYAIGDCSSITQRKIMDDITAIFEAADKNKSSTLTIEEFEDVMDDIILRYPQVEHYLKQKHLRDFTTLWKDLQGNESKEIDIEAFKLALSNADSQVKSLPATAQVAAQQGTYLARCFNRRDHAEENPEGPRRFSGFGRHKFLPFRYKHLGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSQASELANKGVGGVRLDKKIHIWQGFKSSLMWHFMSGGGLVAYCDAKPEYGNEIPKKKVVVLGTGWAGTSFLKNMKSDSYEIHVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRSITRKSGVNIHFSEAECYKIDNKNNRVYCQTSKDKKMGIQEEFSLDYDYLVIAMGGRSNTFNTPGVQEHAYFLKEVDEALKIRQTVVDLFERASLPSIPVEEKKKLLSFVVVGGGPTGVEFSAELHDFVHEDMAKLYPALKDYVKITLLEAGDHILNMFDKRITEFAEHKFARDGIDVRLGSMVVKVSENEITAKERATGQVVSIPHGMVVWSTGIGARPELVEFMKQIGQVNRRALVTDEWLRLEGSDNIYALGDCATINQRKVMEDIAAIFSKSDKSNSGKLDLKEFKNVVGDIIERYPQVEIYLKKNQMRDMNTLLQKSQDSNIVVDIEYFKQALSKVDSQMKNLPATAQVAAQQGVYLADCFNRMELCERYPEGPLRFRGVGRHRFRPFRYKHLGQFAPLGGEQTAAQLPGDWISIGQSTQWLWYSVYTSKQVSWRTRFLVVGDWGRRYTFGRDSSKI 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03292 1153 ProSiteProfiles EF-hand calcium-binding domain profile. 955 990 IPR002048 GO:0005509
Pste1g03292 1153 PANTHER NADH DEHYDROGENASE 628 1153 IPR045024 GO:0003954|GO:0006116
Pste1g03292 1153 SUPERFAMILY FAD/NAD(P)-binding domain 88 306 IPR036188 -
Pste1g03292 1153 PRINTS FAD-dependent pyridine nucleotide reductase signature 738 756 - -
Pste1g03292 1153 PRINTS FAD-dependent pyridine nucleotide reductase signature 799 817 - -
Pste1g03292 1153 PRINTS FAD-dependent pyridine nucleotide reductase signature 927 949 - -
Pste1g03292 1153 PRINTS FAD-dependent pyridine nucleotide reductase signature 635 654 - -
Pste1g03292 1153 SUPERFAMILY FAD/NAD(P)-binding domain 792 952 IPR036188 -
Pste1g03292 1153 ProSiteProfiles EF-hand calcium-binding domain profile. 410 445 IPR002048 GO:0005509
Pste1g03292 1153 SMART efh_1 959 987 IPR002048 GO:0005509
Pste1g03292 1153 SMART efh_1 414 442 IPR002048 GO:0005509
Pste1g03292 1153 ProSitePatterns EF-hand calcium-binding domain. 968 980 IPR018247 -
Pste1g03292 1153 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 623 984 - -
Pste1g03292 1153 Pfam Pyridine nucleotide-disulphide oxidoreductase 89 415 IPR023753 GO:0016491
Pste1g03292 1153 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 80 439 - -
Pste1g03292 1153 Gene3D - 79 462 - -
Pste1g03292 1153 Gene3D - 627 1003 - -
Pste1g03292 1153 Gene3D - 481 580 - -
Pste1g03292 1153 Gene3D - 1004 1153 - -
Pste1g03292 1153 SUPERFAMILY EF-hand 411 1028 IPR011992 -
Pste1g03292 1153 Pfam Pyridine nucleotide-disulphide oxidoreductase 633 957 IPR023753 GO:0016491
Pste1g03292 1153 SUPERFAMILY FAD/NAD(P)-binding domain 250 407 IPR036188 -
Pste1g03292 1153 SUPERFAMILY FAD/NAD(P)-binding domain 632 851 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03292 Pste-Chr1 15077494 15090580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03292 63 577 Chloroplast and Mitochondria Gene Families AT4G21490 63.462 0.0 667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03292 1 15077494 15090580 Pste1g03292 1 15077494 15090580 ECH