Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste1g03287 | ATGCGTGCCAAAGGACGTCAACTGTCACATCACAAAACCCCACGGGCCAACCCAGTCAGAGCAAAAGTTTTTACAAGTTATAGACACCCCATAACAAACAAGCAGAGATCTTTGTCACCATTGCCTGAGACTTTTCTTTCTGAGGTCTTCAGGGAAGCTAGACATGAGCAGAAGAGGTTCTCCACACCAAATCCCCAGAGGGAAAAGAGGAATTCGGTGAACTTGTTGAACAAGGATTCTCTGGAGACTAAGGAATCAATTTCAAATTCATCTTCTCGTAGTCCAAATAGGCTAGTGAAGTCAAAGCACCGCAAGGATTCAGCATGGACTAAGCTTTTAGATAATGGTGGAGGGAAGATTACTGCTGTTGAAACAGATGAAGAGTGGAATGTTGACATGTCTCGGCTGTTTTTGCGCCTGAAGTTTGCTCATGGGGCTCATAGTCGGCTTTACCATGGTGTATATAAGGATGAGACGGTTGCTGTTAAAATAATTATGGTGCCTGAAGATGATGAAAGTGTATCCTTGGCTTTTCGATTAGAGAAACAGTTCATTAGAGAAGTCACCCTGTTATCTCGTCTTCAGCATCCAAATGTTATAAAGTTGTCAGCAGCATGCAGAAAGCCACCGGTTTATTGTATTATCACTGAATATCTTTCTGAAGGTTCCTTGAGGGCATATTTACATAAATTGGAACACCAGGCTATTTCTCTAGAAAAGCTAACAGCTTTTGCTCTGGATATTGCTCGAGGAATGAAATATATACATTCTCAAGGTGTCATTCATCGAGACCTTAAACTTGAAAATGTCCTTATCGATGAAGACACGGAAATCCTATGGGAGAAAGGTTGA | 852 | 0.4167 | MRAKGRQLSHHKTPRANPVRAKVFTSYRHPITNKQRSLSPLPETFLSEVFREARHEQKRFSTPNPQREKRNSVNLLNKDSLETKESISNSSSRSPNRLVKSKHRKDSAWTKLLDNGGGKITAVETDEEWNVDMSRLFLRLKFAHGAHSRLYHGVYKDETVAVKIIMVPEDDESVSLAFRLEKQFIREVTLLSRLQHPNVIKLSAACRKPPVYCIITEYLSEGSLRAYLHKLEHQAISLEKLTAFALDIARGMKYIHSQGVIHRDLKLENVLIDEDTEILWEKG | 283 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste1g03287 | 283 | MobiDBLite | consensus disorder prediction | 55 | 105 | - | - | |
| Pste1g03287 | 283 | Pfam | Protein tyrosine and serine/threonine kinase | 141 | 277 | IPR001245 | GO:0004672|GO:0006468 | |
| Pste1g03287 | 283 | SUPERFAMILY | Protein kinase-like (PK-like) | 124 | 277 | IPR011009 | - | |
| Pste1g03287 | 283 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 91 | 275 | - | - | |
| Pste1g03287 | 283 | FunFam | Kinase suppressor of Ras 1 | 125 | 219 | - | - | |
| Pste1g03287 | 283 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Pste1g03287 | 283 | Gene3D | Transferase(Phosphotransferase) domain 1 | 216 | 281 | - | - | |
| Pste1g03287 | 283 | ProSiteProfiles | Protein kinase domain profile. | 136 | 283 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pste1g03287 | 283 | SMART | serkin_6 | 136 | 280 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pste1g03287 | 283 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 260 | 272 | IPR008271 | GO:0004672|GO:0006468 | |
| Pste1g03287 | 283 | MobiDBLite | consensus disorder prediction | 66 | 96 | - | - | |
| Pste1g03287 | 283 | Gene3D | Phosphorylase Kinase; domain 1 | 125 | 215 | - | - | |
| Pste1g03287 | 283 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste1g03287 | Pste-Chr1 | 15039279 | 15041578 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste1g03287 | 29 | 275 | MAP Kinase Kinase Kinase | AT5G58950 | 55.642 | 7.51e-94 | 285 |
Transcription factors information