Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03276 TTTGAAATGGGAAGAGCTCCTTGCTGTGAAAAGAATGGACTGAAGAAGGGTCCATGGACACCAGAGGAAGACCTTAAACTCATCAATTACATTCAGATTCATGGACCAGGCAATTGGCGATCCCTCCCTAAAAATGCTGATCTGCAAAGGTGTGGCAAGAGTTGCCGCCTTCGATGGACAAATTACCTGAGACCGGATATAAAGAGAGGAAGATTCTCCTTAGAAGAAGAAGACATTATTATTCAGTTGCACAGTGTCTTGGGAAACAAATGGTCAGCCATAGCAGGTAGGTTGCCTGGAAGGACTGACAATGAAATAAAGAACTACTGGAACACTCACATTAGGAAGAGGCTGCTTCGAATGGGAATTGATCCCGTTACACACGCTCCACGTTTAGATCTGCTAGACATGTCCTATATTTTAAGGTTACTGTTGGGAAACCCCTCCCTTTTGAACGTGCAAGGGTTATTAGGTGCTCAAGTTTTGATGAACCAGGACTTGCTAAAGCTGGCTACGACACCCTCTCTTGTATCCATGGACAATAATGAGAACCCAAATTTAGTTTCACAGAACTATGTACAAAGCCAAGTTTCCTTGCCCTTAGACTTGACTCAGTCTCAAATGCCTACTCAGACAATTGCAGCCTTGAGCTGCTCAAGTTCTCCTTCGGGTGAGAGCCTTGTTTTACAACAAAACCAAGTTGATTTGTTAGAGAAGCCCTCCTTGGTGCATTCCCTGAACAATGCAAACCAAAACATGGGGTGTGACTCGGTTCTTCACACGCCTGTGGCAAGCTCATCTCCCAACTATATCAGAAGTGGCACGGAGGAAGAGAGGGATAGCTTTTCTAGCAACTTGTTCCACTTCGAAATTCCAGAGAGTTTGGACATTGCTGACTTTTTCAATTTGTAA 912 0.4419 FEMGRAPCCEKNGLKKGPWTPEEDLKLINYIQIHGPGNWRSLPKNADLQRCGKSCRLRWTNYLRPDIKRGRFSLEEEDIIIQLHSVLGNKWSAIAGRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLLDMSYILRLLLGNPSLLNVQGLLGAQVLMNQDLLKLATTPSLVSMDNNENPNLVSQNYVQSQVSLPLDLTQSQMPTQTIAALSCSSSPSGESLVLQQNQVDLLEKPSLVHSLNNANQNMGCDSVLHTPVASSSPNYIRSGTEEERDSFSSNLFHFEIPESLDIADFFNL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03276 303 Gene3D - 71 118 - -
Pste1g03276 303 FunFam MYB-related transcription factor 15 68 - -
Pste1g03276 303 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Pste1g03276 303 SMART sant 68 116 IPR001005 -
Pste1g03276 303 SMART sant 15 65 IPR001005 -
Pste1g03276 303 FunFam Transcription factor MYB39 71 132 - -
Pste1g03276 303 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Pste1g03276 303 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Pste1g03276 303 Gene3D - 15 68 - -
Pste1g03276 303 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 244 - -
Pste1g03276 303 CDD SANT 71 114 IPR001005 -
Pste1g03276 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Pste1g03276 303 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Pste1g03276 303 CDD SANT 18 63 IPR001005 -
Pste1g03276 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Pste1g03276 303 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03276 Pste-Chr1 14972378 14973887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03276 3 300 MYB Transcription Factor Family AT4G21440 48.000 4.22e-94 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste1g03276 Myb_DNA-binding 2.3e-14 CL0123