Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03266 TTCATTTGAAGAAAGTTGAAAACTCTCTCTGCAGCTTTACCTTTATGGCTTTATCACTTTGCCTCCTTTAACATGCTTGTCCCTCTTGCCTTTTAAGCCCCACTGAGTAGTACCTTCTTTCACCAACACCTCATCCATGGAGTTTGACCTTGAAAACCCTTTGGAAAATCTTCACTCTGATGCTGTCTCTTACCTCTTCCTCATTGAATCTGACCACACCCCATCACAGAATCACTCTCACACTCTCAAAGCCAGAGATCTTGACATCTCCGTCAGAAGAGAACTCATTTCCTTAATATCACAGTTGTCCTGCACTTTGGATCCGGTTTTGTCATACCTTGCTATCAACTATCTGGACCGGTTCCTAGCCAACCAAGAGATTTTGCAACCAAAACCATGGGCACTTAGGCTCATTGCTGTCTCTTGCATTTCTCTAGCTCTCAAGATGATGAGAACTGAATACTCTGCTACTGATGTCCAGGCGCTTTTAAATCAAAGTGATGGTGGCATAATCTTTGAGACACAAACAAAACAAAGGATGGAAGCTCTTATCTTGGCAGTATTAGAATGGAGAATGCGGTCCATCACCCCATTCTCTTTCTTAGCTTTCTTCAATGCCTTAATGGGGGTCAAAGGCTCACCAATGGGGCAAGTTCTGAAAAACCGTGCCTCTGAAATCATATTCAAGTCACAAAGAGAGATACGACTTTGGGAATTCAAGCCATCTATTATTGCTGCATCTGCACTTCTGTGTGCTTCTCATGAGTTGTTTCCTTTTCAATATCCGTCCCTCTTAAAAGCAATATCCGATTCTTCATACGTAAATAAAGAAAGCATGGAGCAGTGCTACAAAGTATTACAAGACATAACCATAGAGGAGGAGTACGACTCTGCGATGAATGGGGTTTCAAGGTCAGAGACACCGATTAATGTGTTGGACCATCATTTTCTGAGTTCAGAAAGTGAAAAAACCAACGGAATCACCGTTGCTGATTCTTCTTCTCCTATAAGACAAGAAAGGGTCCTAAAAAGAAGAAAAATCACTGAATGTGAAAACAATCCAACGACCCAAAATTCTTGGACTAAACCATGCTGAAGAACTACCGAAAGAGAGTGAAGAAAAAAACCACTGTTTACCACTCTGGGTCCATTTGAAAGTGACCATGTTATTAGTCATAATGTCATATCATCTTTGATGTAGTTAACCAAAAAAGAAATAGAAAAATTAGAAGTTATAAAGTGATGGGACGAGATTGAGAAATCACTGTAACATGATCTTGGTACGACTCTCTTTAGGTTGAGAAAGGTCACTCCTAAGTGGCGGGAATTTTTGTTTTTCTTAAACACCAAACAAAAAGACAAAACATGGCTTTGAATTGTAGTGTTGAATTTTTGTGTGTCTGTTATGTTTTGTTGTGGTTTAAGTGGGGTTGTGTCGCTTAGCTTCTGGCAAAGGAATTAATAATTGTAACACTGAAATGATGTAGG 1488 0.3992 MEFDLENPLENLHSDAVSYLFLIESDHTPSQNHSHTLKARDLDISVRRELISLISQLSCTLDPVLSYLAINYLDRFLANQEILQPKPWALRLIAVSCISLALKMMRTEYSATDVQALLNQSDGGIIFETQTKQRMEALILAVLEWRMRSITPFSFLAFFNALMGVKGSPMGQVLKNRASEIIFKSQREIRLWEFKPSIIAASALLCASHELFPFQYPSLLKAISDSSYVNKESMEQCYKVLQDITIEEEYDSAMNGVSRSETPINVLDHHFLSSESEKTNGITVADSSSPIRQERVLKRRKITECENNPTTQNSWTKPC 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03266 319 PANTHER CYCLINS 16 252 IPR039361 -
Pste1g03266 319 SUPERFAMILY Cyclin-like 12 147 IPR036915 -
Pste1g03266 319 Gene3D - 20 239 - -
Pste1g03266 319 SUPERFAMILY Cyclin-like 134 246 IPR036915 -
Pste1g03266 319 SMART Cyclin_C_2 150 263 IPR004367 -
Pste1g03266 319 Pfam Cyclin, N-terminal domain 21 147 IPR006671 -
Pste1g03266 319 CDD CYCLIN_AtCycD-like_rpt2 150 241 - -
Pste1g03266 319 SMART cyclin_7 48 141 IPR013763 -
Pste1g03266 319 Pfam Cyclin, C-terminal domain 150 248 IPR004367 -
Pste1g03266 319 FunFam D6-type cyclin 30 144 - -
Pste1g03266 319 Gene3D - 30 148 - -
Pste1g03266 319 FunFam D6-type cyclin 145 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03266 Pste-Chr1 14909558 14911825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03266 1 299 Core Cell Cycle Gene Families AT4G03270 42.722 8.51e-72 223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03266 1 14909558 14911825 Pste1g03266 1 14909558 14911825 ECH
Pste3g02821 3 20919831 20921994 Pste1g03266 1 14909558 14911825 PCT