Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03257 GCGTTTCAAGTCCCTGTATTAAAACCGAGGAACCCTATTTTCTTTTGCTTAGAGCTGATTTGTCCAGTTAACTTTGGTCTCAGAGAAAGATATTCCAACACTATGGTAAGGGCTCCTTATTTTGATAAAAATGGAATAAAGAAAGGTGCATGGAGTGAAGAAGAGGACAAGAGGCTTATAGCATATGTTGAGAGATATGGCCATCCCAACTGGCGTCAACTACCAAACTTTGCAGGGTTGCAAAGATGTGGAAAGAGCTGCAGACTACGTTGGATGAATTACCTGCGGCCAAATCTAAAACGAGGGAACTATACCCAGAAGGAAGAACAAATAATCACAGATTTGCATAAAAAGCATGGAAATAAATGGTCTCTGATTGCTGAAAGTTTACCTGGAAGAACTGACAACGAGATAAAGAACTATTGGCACAGCCACCTAAAGAAGTTCTTAAAGGGAAATGAGAACAGCCCTTATGATGATGATGATGAGTTGAAGCTCACCGAATGCAAAGAATTAGCAAGACCTATAAACGAGGCTCTTGGTGCTGATTCCCACCACATTTTGGACAGTTCAATGTCCATTTCCTCTGAAACTTCCTACACGGAAGACAATTCCCCTTCATTTTCCTCTAGTCACACAGAATCAACCTTGAACTTGTGCAAGGAAGATGAAAGCATTGCTTCATGGTTGGATGGATTTAGTAGCAATTTCTGGACTGAACCGTTTATTTCAGAAAACGCACTTAGTCAGGACTACTTTCCCATTTCTTCATACGGAACAGAACCATTTTTCTTGTGGTAATAGTGAACAGTTGTTCTGCCGAGTGACTGTAGAATTCCATAGTTATTATATATATATATATACAGTAAATAGTGTTGCCCTTTTGCTCGTATGTTCTTGATTATTGAGGAATTTTGGG 919 0.3961 AFQVPVLKPRNPIFFCLELICPVNFGLRERYSNTMVRAPYFDKNGIKKGAWSEEEDKRLIAYVERYGHPNWRQLPNFAGLQRCGKSCRLRWMNYLRPNLKRGNYTQKEEQIITDLHKKHGNKWSLIAESLPGRTDNEIKNYWHSHLKKFLKGNENSPYDDDDELKLTECKELARPINEALGADSHHILDSSMSISSETSYTEDNSPSFSSSHTESTLNLCKEDESIASWLDGFSSNFWTEPFISENALSQDYFPISSYGTEPFFLW 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03257 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 150 IPR017930 -
Pste1g03257 266 Pfam Myb-like DNA-binding domain 101 146 IPR001005 -
Pste1g03257 266 Pfam Myb-like DNA-binding domain 48 95 IPR001005 -
Pste1g03257 266 CDD SANT 103 146 IPR001005 -
Pste1g03257 266 SMART sant 100 148 IPR001005 -
Pste1g03257 266 SMART sant 47 97 IPR001005 -
Pste1g03257 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 95 IPR017930 -
Pste1g03257 266 SUPERFAMILY Homeodomain-like 45 142 IPR009057 -
Pste1g03257 266 CDD SANT 50 95 IPR001005 -
Pste1g03257 266 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 35 220 - -
Pste1g03257 266 ProSiteProfiles Myb-like domain profile. 96 146 IPR001005 -
Pste1g03257 266 FunFam MYB-related transcription factor 47 100 - -
Pste1g03257 266 ProSiteProfiles Myb-like domain profile. 43 95 IPR001005 -
Pste1g03257 266 Gene3D - 41 101 - -
Pste1g03257 266 Gene3D - 103 171 - -
Pste1g03257 266 FunFam Transcription factor MYB14 isoform A 103 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03257 Pste-Chr1 14866805 14868292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03257 35 194 MYB Transcription Factor Family AT2G31180 53.125 3.31e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste1g03257 Myb_DNA-binding 5.7e-15 CL0123