Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03247 GTTGAGGAAAATGAAACACGTTTTGGAGGTGGAGCATATAAATAAGTGACTGCTTCAGAGACAGAAACTATCATTAATTGCTCTCTCTCACACCCGCTCGCTTACAGAAAAAACCAAAACAATATCCTCACACCTGCACTGACGCACTAAACTGTCTTCTGTCGACCCTCAGAGTCCAAGTCATATCACAAAGATGGTAAGAACCCCGTCTTGTGACAAAAATGGACTTAGGAAAGGTACTTGGACTCCTGAGGAAGATACCAAGTTAATGGCTTATATCACTAGGTATGGCTCCTGGAATTGGCGCCAACTTCCCAGGTTTGCAGGTCTGGCAAGATGTGGGAAAAGTTGTAGATTGAGATGGATGAATTACCTAAGGCCTAACCTCAAAAGAGGCCACTTCACTCAGCAAGAAGAAGAATGCATCATCAGAATGCACAAAAAACTTGGTAACAGATGGTCTGCCATAGCGGCTGAGTTACCTGGAAGAACGGATAATGAAATAAAAAACCATTGGCACACCACACTGAAGAAGAGGTCTCAACAAAACACAGTCACAAGTGAAGCTAGAGCCTCGAAATCAAAGAATAAAGAATCCAAGGCAGGGAAAGAGTCGGTCCCCAACAATAATGGTGTAACTGTTACTCTTCCAGCCACCTCCCAGATTTCAGATAATTCATCATTATCGCCCGTATCATCCTCCAGCAGCATGTTTTCCTCCATATCTTCTGATCATTCCACTGCTGCCAGAATGGAAAATTTGGTGTTTCAAGATGACCTCGGTTTTCTCGATTCATACATACATCCTGTGAATGAAAGTTTCTGGCCAGAGCTAAATCTGGATGAAATAGTCTCAGCTGAAAATAATGGCCATTTTCAAACTTGTGCACTGTCTCCACATCAGTCAAGCAGTCAAAGTATGGTTATGGATAATGACTTCGGTTGTTTTCTCGATGCATACACAGAAGCAACAATTGATAACTTTTGGACACAGCCATATGCGGTTGACATGTCCTACGTTTCTACCCAACTTCTTGTCCCTTCCGTGGTAGAATCTGACTATTTTACTCCTATTTATGATGATCTGTGGGGTTAAAGTCACATGTATTAGCTTATTAGAATATTCTAATGAAAAAAAATAAAAAATACTAGAGTTTTGAGAGTAACACTACTATTATACAGTCATGAATGGTGATAAGTAATGATCGATAGTTATTGTTAGTTATTTCGGGTGTGTATTACAAATAAGGTTAATATAAACCACATTATAAAGTTG 1276 0.4005 MVRTPSCDKNGLRKGTWTPEEDTKLMAYITRYGSWNWRQLPRFAGLARCGKSCRLRWMNYLRPNLKRGHFTQQEEECIIRMHKKLGNRWSAIAAELPGRTDNEIKNHWHTTLKKRSQQNTVTSEARASKSKNKESKAGKESVPNNNGVTVTLPATSQISDNSSLSPVSSSSSMFSSISSDHSTAARMENLVFQDDLGFLDSYIHPVNESFWPELNLDEIVSAENNGHFQTCALSPHQSSSQSMVMDNDFGCFLDAYTEATIDNFWTQPYAVDMSYVSTQLLVPSVVESDYFTPIYDDLWG 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03247 300 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 236 - -
Pste1g03247 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pste1g03247 300 CDD SANT 16 61 IPR001005 -
Pste1g03247 300 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pste1g03247 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pste1g03247 300 MobiDBLite consensus disorder prediction 139 169 - -
Pste1g03247 300 FunFam Transcription factor MYB14 69 142 - -
Pste1g03247 300 MobiDBLite consensus disorder prediction 109 169 - -
Pste1g03247 300 CDD SANT 70 112 IPR001005 -
Pste1g03247 300 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pste1g03247 300 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pste1g03247 300 Gene3D - 6 66 - -
Pste1g03247 300 FunFam MYB-related transcription factor 13 66 - -
Pste1g03247 300 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pste1g03247 300 SMART sant 66 114 IPR001005 -
Pste1g03247 300 SMART sant 13 63 IPR001005 -
Pste1g03247 300 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pste1g03247 300 Gene3D - 69 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03247 Pste-Chr1 14784743 14786329 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03247 1 214 MYB Transcription Factor Family AT2G31180 46.729 1.66e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste1g03247 Myb_DNA-binding 1.7e-11 CL0123