Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03244 GTGGTCAGACACTGAAATCATTCTTAATCACTGCACGCATGCTTAATTATCAACACAACCAAATTAGCCTGTTGCAGAGAGGAATAATTAACGCACTCAGCCACTTTGAGTTGGAGTGTTTTTGTTTCTCTCAAAGATGGTTAGAACCCCATCTTGTGACAAAAGCGGACTGAGGAAAGGTACTTGGACTCCCGAGGAAGATACCAAGTTAATTGCTTATGTTACTAGGTATGGCTGCTGGAATTGGCGCCAACTTCCCAAGTTTGCAGGTCTGGCAAGATGTGGGAAAAGTTGTAGATTGAGATGGATGAATTACCTAAGGCCTAACCTCAAAAGAGGGCACTTCACTCAGCAAGAAGAAGAATGCATCATCAGAATGCACAAAAAACTTGGTAACAGATGGTCTGCTATAGCAGCTGAGTTACCTGGAAGAACAGATAATGAAATTAAAAACCATTGGCACACCACCCTCAAGAAGAGGTCTCAACAAAGCACACTCACAAATGAAGAAGCTAGAGTCTCTAAATCAAAGAATAAAGAATCCAAGCCAGGGAGGGACACAGTTCCCAACAATAATGGTGTTACTATTACTCTTCCAGACACGCCCCAGATTTCAGATAATTCATCATTATCGCCTGTATTATCCTCCAGCAGCGAGTTTTCCTCTATAACTTCAGATTATTCCACTTCTGCCAGTATGGAAAATTTGGCGTTTCAAGACGACTTCGGTTTTCTAGATTCATACGTAGATTCTGTGAATGAAAGTTTCTGGACAGAACTAATTCTGGATGGAATTTCCTACAATGCACCATGTGAAACACTATCGGGAGATACTAATGGCTCTCTTCAAAGTACAAATTCTAGCCAGATACATGATTCTCGTGCAATGTCTCCGATTCAATCAAGCAGCGAAACTATGGTTGTGGACAATGATTTTTGCGGCTATCTTGATTCATACTCAGAGGCAACTGTTGATAACTTTTGGACACAGCCATATGTGGCTGACATAACCCAAGTTCCAACCGAGCTATTGGTATCCGTGGCAGAATCTGAATATTTTCCTCCAGTATACGATGACACGTGGCACCAAAGTGTTTTGTACAATGAAAATCTTGGCCTATTATTCTGATGAAAAAAATCACTCTATGATCAGAGATCAATAGTTTTTGAGTTGGTGCTTTGAATTACTTATCCAACTTGTATGGACCTTTATATTTTGGGTTAAGGTCTTTTATAATAGCGTTGTAGCAGTTGCTTTCCTGTATTTTTTGTCTTGTACCAGGTTTTGATATAGTGAATTGCTTCTGCTTTACTCTGCTTAATCGATCAACTTACTGGTTTTTGCTATTCCCTTAATTTGGTTATCTTGGCGATGAGCTTTCAAAAAATTCTGGGAAGTGCCGATCTATTGAGTTGTTGGAAATGGATGAGAGGCAATAAGGGATGTTGGACAAGTGACCTCAATTTACTTAAGAGGGGAGGTGAATTAAGTAGATCAAAATTTAAACTTAGTTTTCTTTCTTTTTGAATTTATATTAGAATATTTAAAAATGAAAGTGAAGTATTCAAATATGCAACAGAATAAATAGATAGAAGTATAGGAAAGAGAAATATGCAAACTCTTTTATACTGGTTCAACCAATCCACTTGCCTACGTCTAGTCCTCAAGTAACCCCACTTGACGTTTTTACTGTATTTGTAAATCACTTCACAAATGAATGAATTCTCAATTATCTT 1737 0.3828 MVRTPSCDKSGLRKGTWTPEEDTKLIAYVTRYGCWNWRQLPKFAGLARCGKSCRLRWMNYLRPNLKRGHFTQQEEECIIRMHKKLGNRWSAIAAELPGRTDNEIKNHWHTTLKKRSQQSTLTNEEARVSKSKNKESKPGRDTVPNNNGVTITLPDTPQISDNSSLSPVLSSSSEFSSITSDYSTSASMENLAFQDDFGFLDSYVDSVNESFWTELILDGISYNAPCETLSGDTNGSLQSTNSSQIHDSRAMSPIQSSSETMVVDNDFCGYLDSYSEATVDNFWTQPYVADITQVPTELLVSVAESEYFPPVYDDTWHQSVLYNENLGLLF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03244 330 FunFam MYB-related transcription factor 13 66 - -
Pste1g03244 330 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 234 - -
Pste1g03244 330 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pste1g03244 330 FunFam Transcription factor MYB14 69 142 - -
Pste1g03244 330 CDD SANT 16 61 IPR001005 -
Pste1g03244 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pste1g03244 330 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pste1g03244 330 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pste1g03244 330 CDD SANT 70 112 IPR001005 -
Pste1g03244 330 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pste1g03244 330 SMART sant 66 114 IPR001005 -
Pste1g03244 330 SMART sant 13 63 IPR001005 -
Pste1g03244 330 MobiDBLite consensus disorder prediction 113 167 - -
Pste1g03244 330 Gene3D - 14 66 - -
Pste1g03244 330 MobiDBLite consensus disorder prediction 140 167 - -
Pste1g03244 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pste1g03244 330 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pste1g03244 330 Gene3D - 68 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03244 Pste-Chr1 14760318 14762247 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03244 1 216 MYB Transcription Factor Family AT2G31180 48.624 1.34e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste1g03244 Myb_DNA-binding 8.9e-13 CL0123