Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03240 ATGTTTATGACTGTATCAGAGTTTATGTCTAGGGGAAGCTTATATGACTTTCTGCACAAACAAAGAGGTGTATTTAAGCTTCCATCTTTGCTAAAAGTAGCAATAGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGGGACCTCAAGACTGCCAATCTTCTGATGGATGAAAATGAAGTGGTCAAGGTTGCTGATTTTGGGGTTGCCAGAGTGCAAACTCAGTCTGGAGTGATGACAGCCGAAACTGGAACATACCGATGGATGGCTCCTGAGGTTATTGAACATAAACCATATGATCAGAAGGCAGATGTTTTCAGTTTTGGAATAGCTCTTTGGGAGCTTTTAACTGGAGAACTGCCTTACTCTTGCTTGACCCCACTACAAGCAGCAGTTGGCGTGGTGCAGAAGGGCCTGCGGCCTACAATTCCCAAAAACACACACCCAAGACTTTCTGAACTGCTTCAGCAGTGCTGGCAACAAGATCCGACGCAGAGATCAAATTTCTCTGAAATAATAGAAATTCTTCAGCAGATAGCAAAAGAGGTCAATGATCACAAGGATAAGTCATCCCATGGCTTTCTCTCAGCTCTTAGACGGGCACATAATTGATATTGATATAAGAGGATTACACAACAGTATAGCCTTTTTGTCCTGTATAGTAGTCAGACTCTGACCAAAGATCTATTTCAGTTGGTTGTTTCCACTCTTGAAAGATTCCGTTGTATTTTCTCTTGTCTTAAATATTTTATAATCTGTCTTTCTCTAGTTTGTCTTCTCAACATGTTCGCCTGTGAATAGCATGGATGCAAGATTTGAAAGTCGAAAATTCAAGGCGTCATTTAATTATAATTTTTTGCTCATTGTATGCCATACTTTTTGAATGGGAGCTTTTTCGATGCACTCCCCTGTATCCAGACCATAGTTGACTAGTAGAGGCGTTATATGTTTGAGAATTGAGATGTACTAGGCTTACCTGTAATAAATTTGGCATTTATCAGTATGCAATTTAATTCCAGAAGTATTAAAACACTAGTTATCATCATCTTGAGTTTAATAGACTTGTATTTTCGGTATTTTTTTTTTT 1102 0.3838 MFMTVSEFMSRGSLYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYSCLTPLQAAVGVVQKGLRPTIPKNTHPRLSELLQQCWQQDPTQRSNFSEIIEILQQIAKEVNDHKDKSSHGFLSALRRAHN 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03240 208 Pfam Protein tyrosine and serine/threonine kinase 3 181 IPR001245 GO:0004672|GO:0006468
Pste1g03240 208 SUPERFAMILY Protein kinase-like (PK-like) 3 188 IPR011009 -
Pste1g03240 208 PRINTS Tyrosine kinase catalytic domain signature 152 174 IPR001245 GO:0004672|GO:0006468
Pste1g03240 208 PRINTS Tyrosine kinase catalytic domain signature 6 19 IPR001245 GO:0004672|GO:0006468
Pste1g03240 208 PRINTS Tyrosine kinase catalytic domain signature 89 99 IPR001245 GO:0004672|GO:0006468
Pste1g03240 208 PRINTS Tyrosine kinase catalytic domain signature 43 61 IPR001245 GO:0004672|GO:0006468
Pste1g03240 208 PRINTS Tyrosine kinase catalytic domain signature 108 130 IPR001245 GO:0004672|GO:0006468
Pste1g03240 208 ProSitePatterns Serine/Threonine protein kinases active-site signature. 49 61 IPR008271 GO:0004672|GO:0006468
Pste1g03240 208 SMART serkin_6 2 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03240 208 ProSiteProfiles Protein kinase domain profile. 1 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03240 208 FunFam serine/threonine-protein kinase HT1 11 201 - -
Pste1g03240 208 Gene3D Transferase(Phosphotransferase) domain 1 1 188 - -
Pste1g03240 208 CDD STKc_MAP3K-like 2 181 - -
Pste1g03240 208 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03240 Pste-Chr1 14747624 14750609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03240 5 207 MAP Kinase Kinase Kinase AT4G35780 78.641 2.62e-118 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pste1g03240 PK_Tyr_Ser-Thr 1.3e-54 CL0016