Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03237 AAAACACTCATTAGTACCTGGAAAGAGAACCCAACCAAACAAGCAAGATTAAAATAAAAAAGGAGACTCAAAAAGAGTTCTCCGTCAACTGAATCTCCATCATCTTTCCCCCTTTCGCTTCTTCGTGTTTTTTCCTCTCTCGCTTCTGCTTCTTCCTCTTTCGTTCTTCGCGATCCCCTTTCTCTCTCTCCTTTGCTTCTTCTTCTTGTATGTGTGGCGGTGCTGATCGCGTGCGCCAATGGTGATCGAGCATGACATTGAGAGCTGCGGGAGCAGAGCGGTGCAGTCGTCGCATGCGCATCATCCGCGGCATCACCGCCAGAAGCTCGAGGTGTACAATGAGGTTCTTCGCCGAATTCAGGAGTCCGATTGCGAGGAGGCGCACGTTCCAGGCTTCGACGATCAGCTCTGGCTTCACTTCAATCGTCTTCCTGCTAGGTACGCATTGGATGTTAACGTGGAGAGGGCGGAGGATGTTCTAGCTCATAAGAGATTGCTCAAGTTGGCGGAGGACCCTGCTTCTCGACCTGCATTTCAAGTTCGCTTAGTACAGGTATATCCTTTTGGTGGTGCCAATTATTCTGATTCCATACATTCAGATCATTCTGAGAAAGAAGATGCACAAAGTTCTGTTAACTATTCTTTAAAGCAGGGAATTCACCCACCACCTACATTTGGTTCATCCTCTAATCTTGAAGCTCTTGCACTTCAAACAACTAAAAATAGCTTTGAAGATGGGGGCAGTCCTATGAGTGTGACACCATATTTTCACGGGCCTATGCACGAGATTACCTTCTCTACAATTGACAAGCCTAAACTCCTTAGTCAGTTAACTTTAATACTTGGTGAGATGGGACTGAATATTCAAGAAGCTCATGCATTTTCCACCACTGATGGATTTTCTCTGGATGTCTTTGTCGTTGAGGGATGGCCTAATGAGGAAACTGAGGAGCTGATAAGTGTGTTGGAAAAGGAAATTTTAAAGGTTAAGGAGCAAAATTTGTCAAATCAGGGCGTACATTATGTTGCCAATGAACAATACCAGGCAAGGACAGAACCCTTCCCTCATTGCATTCAAATACCATCTGATGGAGCTGATGTCTGGGAAATTGATACCAACCAGCTGAAATATGAAAACAAAGTTGGCTCTGGGTCATTTGGTGACTTGTACAGAGGTACATATTGCAGTCAAGATGTGGCTATCAAAGTTCTAAAGCCTGAGCGCATAAGTACAGATATGCTGAGAGAGTTTGCGCAGGAAGTTTATATCATGAGGAAGATTCGACACAAGAATGTTGTTCAGTTCATCGGTGCATGTACTAGGCCCCCAAATCTATGTATTGTTACTGGTAAATAG 1357 0.4451 MVIEHDIESCGSRAVQSSHAHHPRHHRQKLEVYNEVLRRIQESDCEEAHVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHKRLLKLAEDPASRPAFQVRLVQVYPFGGANYSDSIHSDHSEKEDAQSSVNYSLKQGIHPPPTFGSSSNLEALALQTTKNSFEDGGSPMSVTPYFHGPMHEITFSTIDKPKLLSQLTLILGEMGLNIQEAHAFSTTDGFSLDVFVVEGWPNEETEELISVLEKEILKVKEQNLSNQGVHYVANEQYQARTEPFPHCIQIPSDGADVWEIDTNQLKYENKVGSGSFGDLYRGTYCSQDVAIKVLKPERISTDMLREFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTGK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03237 372 Pfam Protein tyrosine and serine/threonine kinase 296 370 IPR001245 GO:0004672|GO:0006468
Pste1g03237 372 ProSitePatterns Protein kinases ATP-binding region signature. 302 323 IPR017441 GO:0005524
Pste1g03237 372 CDD ACT_TyrKc 181 248 - -
Pste1g03237 372 FunFam Serine/threonine-protein kinase isoform 1 286 371 - -
Pste1g03237 372 SUPERFAMILY Protein kinase-like (PK-like) 274 370 IPR011009 -
Pste1g03237 372 ProSiteProfiles Protein kinase domain profile. 296 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03237 372 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 143 370 - -
Pste1g03237 372 SUPERFAMILY ACT-like 181 245 IPR045865 -
Pste1g03237 372 ProSiteProfiles ACT domain profile. 183 258 IPR002912 -
Pste1g03237 372 Gene3D Phosphorylase Kinase; domain 1 286 371 - -
Pste1g03237 372 Coils Coil 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03237 Pste-Chr1 14741448 14747262 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03237 8 370 MAP Kinase Kinase Kinase AT4G35780 65.753 7.13e-161 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pste1g03237 PK_Tyr_Ser-Thr 4.6e-14 CL0016