Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste1g03232 | AGGAATGGGAAACTCTCTTGCACTTGTTGCCTAGTATCTTTCACCAAATTCTCTTCTCTCTCTCACACGAATTGTTATAGAGTGAGAGAAAGAGAGTTTGATATAGGTTTAGATCGAAAGATGGTGAGAACCCCTTACTGTGACAAAAATGGAATGAAAAAAGGAACATGGACTCCAGAAGAAGACATGAAGTTGATTGCTTACATTACTACCCATGGCTATAAGAATTGGCGCCAACTACCCAAGCTTGCAGGTCTTGCTAGGTGTGGAAAGAGCTGCAGGTTAAGGTGGATGAATTATTTAAGGCCAGGCATCAAGAGAGGGAACTTCACTGCTGAAGAAGAAGAGACTATTATCAAATTACACGCAACTCTTGGAAATAGGTGGTCTGTGATTGCCTCTCACTTACCTGGAAGATCAGACAACGAGATAAAGAATCATTGGCATGCCCATCTTAAGAAGCACTTTAAACACAATTCAGTAACAACTGAGAAAGCTGAAGCCTCCAATTCAAATCATCACTCCCCAGTTGAAATATCTATTCAAGAGAATAATTACTCTGTGGAAGTTGCTGCAACTGCAAGCCCTTACCATAACAGTTCTATAGCTACTTATTCCCATGCTTCTCCATCGTCGACCCAGCTCACGTCGTTGAGCGATTTTTTATGCTTGATAAGTGAACCTGAACCAGCCAGTGATGGGAATTTGCTTGATGACTTTGCTGATTTCGTGGTGGAAAATACAGATCCTATAAGTAAATATTCTTGGAAAGAACTCTATGATATTTCGTACTTAGGCGAATTTCTGGTACCTTTTGTCGCTGAACCCGAAAGTTTTTGTCCAGGTTATGATGTTTGGGGGCTATTGGAATAGGAACAGGATATATCAGCTTGGTTTTTCTTCTTTCTTCAATGTTTTTTTCAGACAAACAAATGCATGCTTATTAATTTTGATGAAAGGAGTATTATATCCATATGCATGGGATTATGGGGAAATGAATCATTCTAT | 1008 | 0.3948 | RNGKLSCTCCLVSFTKFSSLSHTNCYRVREREFDIGLDRKMVRTPYCDKNGMKKGTWTPEEDMKLIAYITTHGYKNWRQLPKLAGLARCGKSCRLRWMNYLRPGIKRGNFTAEEEETIIKLHATLGNRWSVIASHLPGRSDNEIKNHWHAHLKKHFKHNSVTTEKAEASNSNHHSPVEISIQENNYSVEVAATASPYHNSSIATYSHASPSSTQLTSLSDFLCLISEPEPASDGNLLDDFADFVVENTDPISKYSWKELYDISYLGEFLVPFVAEPESFCPGYDVWGLLE | 290 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste1g03232 | 290 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 41 | 206 | - | - | |
| Pste1g03232 | 290 | CDD | SANT | 56 | 101 | IPR001005 | - | |
| Pste1g03232 | 290 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 102 | 156 | IPR017930 | - | |
| Pste1g03232 | 290 | ProSiteProfiles | Myb-like domain profile. | 102 | 152 | IPR001005 | - | |
| Pste1g03232 | 290 | FunFam | MYB-related transcription factor | 53 | 106 | - | - | |
| Pste1g03232 | 290 | Gene3D | - | 109 | 179 | - | - | |
| Pste1g03232 | 290 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 49 | 101 | IPR017930 | - | |
| Pste1g03232 | 290 | Pfam | Myb-like DNA-binding domain | 107 | 151 | IPR001005 | - | |
| Pste1g03232 | 290 | Pfam | Myb-like DNA-binding domain | 54 | 101 | IPR001005 | - | |
| Pste1g03232 | 290 | Gene3D | - | 53 | 106 | - | - | |
| Pste1g03232 | 290 | ProSiteProfiles | Myb-like domain profile. | 49 | 101 | IPR001005 | - | |
| Pste1g03232 | 290 | SUPERFAMILY | Homeodomain-like | 51 | 148 | IPR009057 | - | |
| Pste1g03232 | 290 | CDD | SANT | 109 | 152 | IPR001005 | - | |
| Pste1g03232 | 290 | SMART | sant | 53 | 103 | IPR001005 | - | |
| Pste1g03232 | 290 | SMART | sant | 106 | 154 | IPR001005 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste1g03232 | Pste-Chr1 | 14708248 | 14710400 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste1g03232 | 41 | 227 | MYB Transcription Factor Family | AT2G31180 | 50.267 | 9.83e-60 | 189 |
Transcription factors information