Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03220 CGTCACGTGCGTTGGTGTGTAGGCGTGTGGTATACTCTCCACGTCGCAATACGTCGACCAAATTTGATTGAAAAAAAGTGGTACTGTGCTAATAAAAATGACATGGAATCCTGTGAAACCGCCAGCATAGAAAACACACTCTGTCTGTCCCCTCCGCCAGGCAATACAAACAAAACAAGTGAAGAAATCCAAAACCAACGCCAGAAACAAACAAAAACCGCACTCAATCTCCTTTTTAACTTGAAAAAACCACGTGACTTCACTTCCTTCTTTCCAAGCTATACCAAACCTTCCATAATAGTATTTGCTTTGCTCCTTCCGGGAAGGGAAAAAGGGAGAAGCAGAAGGCAAATAAAATCTAAACCCCCTTTCTCTCCCGGTGGTGGGAACGCACCTCTCACTCCCATGGCGGCCACTGGCGGCGGCGACACTGGCGTTACCTATCTCCACGGCGACCTCGATTTGAAAATTATCGAGGCACGCCACTTGCCAAACATGGACATCTTCTCCGAGCGTGTTCGCCGCTGCGTAACTGCCTGCGACACTATCAAATACGGAGGAGGTGGAGCCGCCGACGGCGACGGCGAACCCAACCGGACGCGGACGCACCACCGCCGCAGAATCATCACCAGCGACCCCTACGTCACCGTTTCGGTACCGCAGGCGACTGTGGCGCGCTCGCGGGTGCTGAAGAACCAGCCGAACCCTGTCTGGAACGAGCGGTTCCACATCCCGCTCGCGCATCCCGTCGTCGATTTGGAATTCCGCGTCAAGGACGACGACGTTTTCGGCGCGCAGATCATGGGAACAGTGAAGATTCCGGCGCGGCGGATTGCCACCGGCGAGACGATTTCCGACTGGTTCCCGATCGTCGGAGCGTCCGGGAAGCCGCCGAAGCCGGACACGGCGCTGCGCCTCGAGATGACGTTCACGCCGGTGTCGGAGAATTTACTGTACCAGCGAGGCATTGCGGCAGATCCCGAGCACAGCGGCGTGAGGCACACGTATTTTCCTGTGAGGAAGGGAAGTTCGGTGAGGTTGTACCAGGACGCGCACTGTACCGACAGAACGTTACCGGAGATTAAGCTTGAGAATGGAATGGTTTATAGGCACGAGAAGTGTTGGGAGGATATTTGTTATGCAATTTCTGAGGCTCATCACATGGTGTATTTGGTGGGTTGGTCGATTTACCATAAGGTGAGGCTTGTTAGAGAGCCTACTAGGCCGTTGCCTCGAGGTGGCAATTTGACTCTTGGCGAGTTGCTTAAGTATAAGTCTGAAGAAGGGGTTAGGGTTCTGTTGCTGATTTGGGATGACAAGACTTCCCACGATAAGGTTTTCTTAAAGACGTCTGGTGTGATGGGAACTCATGATGAGGAAACCAGGAAGTTTTTTAAGCATTCTTCTGTTGTTGGAACGGTCTTCACACACCACCAAAAATGTGTCATTGTGGACACACAAGCTGCTGGTAATAATCGAAAGATAACTGCTTTTATAGGAGGTCTTGATCTATGTGATGGTCGCTATGACACACCTGAGCATCGACTGTTTCGTGATCTTGACACTGTATTTTCTGGTGATTTCCACAATCCTACATTTCCTGCTGGAACAAGGGTTCCTAGACAACCATGGCATGATTTGCACTGCAGAATAGAAGGACCTGCTGCATATGATGTTCTTATTAACTTTGAGCAGCGATGGAGAAAAGCAACTAAATGGAAAGAGTTTGCGATCCTTTTCAAAAAAGCCTCTCAATGGCATGATGATTCTTTAATAAGAATAGAACGCATCTCATGGATATTAAGTCCTTCTATTTCTACCTCAAAGGATATTTCTAACTCAAAGGAAAAACTGGATTATACTATTGTTCCAGAGGATGACCCTTTAGTATGGGTTTCTAGTGAAGATGATCCTGAAAACTGGCATGTTCAGATCTTCCGCTCCATTGACTCAGGATCTCTGAAAGGATTTCCCAAAAATGTTGATGTTGCTTTGTCCCAGAATCTTATCTGTGCTAAAAATTTGGTTATAGACAAAAGCATTCAAACAGCATACATTGAAGCTATCAGATCTGCTCAACACTTTATTTATATTGAAAACCAATATTTCATTGGGTCATCGTATGCGTGGCCATCTTATAAAGATGCAGGGGCTGATAATCTCATCCCAATGGAATTGGCACTGAAAATTGCGTGTAAAATCAGAGCTAAGGAGAGATTTGCTGTCTATATTGTTTTACCAATGTGGCCAGAAGGAGATCCTAAAACTGGGGCTATGCAAGAAATCCTCTTTTGGCAGGGCCAGACGATGCAAATGATGTATGATGTTGTTGCTCAAGAATTGAAATCAATGAAACTTACTGATGTGCACCCACAAGATTATCTCAACTTTTATTGCCTTGGTAATCGGGAACACTTCAATGAAGAAACTTCAAGTGCTAATGGTGCACAGATCTCGGGAGCGTATAAATATCGTCGTTTCATGATTTATGTTCATGCTAAGGGAATGATTGTTGATGATGAGTATGTTATAATTGGATCTGCTAATATAAACCAAAGATCCATGGCTGGTTCTAAAGATACTGAGATAGCTATGGGTGCATATCAACCCCATTACACATGGGCATCAAAGAAAAGACATCCATATGGCCAGATTTATGGTTACAGAATGTCACTTTGGGGAGAGCATCTTGGCATGTTGGACGAAACTTTTGAGGAACCAGAGAGAGTGGAGTGTGTGCATAAAGTGAATGCAATTGCAGACAATAATTGGAAATTATTCGTTTCTGAAGATTTCTCACTCTTGCAGGGACATCTTCTTAAGTATCCTGTAAAGGTAGATTCCGATGGGAAGATTAGATCACTACCTGACTGTGAGAATTTCCCCGATGCTGGTGGTAAGATATTGGGGGCTCACTCCACAGCTATTCCAGACATCCTAACAACGTAAAGATTGCGTGATGCGTTTTCCTGCCTCTTCCTGAGAAAGGGGTTTGGGTGAAGTGATGTAGCTTTCTGTATTTAAAATGGTTGTTTAGATCACTTGTAAATCTTTCGAACAGTATTGATTCATATTTTGAAAGGATCATTTGTCCATTACGCTCTCTTTTATTTAGTCATAGTTTTTGGCAATTGAATCAGAGTTCATAGATTGTATGTTGATTTCCATGAAATATAAGATAGACTCTACAAATTAGATCAAAACAATTGTTGTTTTTGGTTATTTTTTACCCATTAGGATTCAACT 3246 0.4473 RHVRWCVGVWYTLHVAIRRPNLIEKKWYCANKNDMESCETASIENTLCLSPPPGNTNKTSEEIQNQRQKQTKTALNLLFNLKKPRDFTSFFPSYTKPSIIVFALLLPGREKGRSRRQIKSKPPFSPGGGNAPLTPMAATGGGDTGVTYLHGDLDLKIIEARHLPNMDIFSERVRRCVTACDTIKYGGGGAADGDGEPNRTRTHHRRRIITSDPYVTVSVPQATVARSRVLKNQPNPVWNERFHIPLAHPVVDLEFRVKDDDVFGAQIMGTVKIPARRIATGETISDWFPIVGASGKPPKPDTALRLEMTFTPVSENLLYQRGIAADPEHSGVRHTYFPVRKGSSVRLYQDAHCTDRTLPEIKLENGMVYRHEKCWEDICYAISEAHHMVYLVGWSIYHKVRLVREPTRPLPRGGNLTLGELLKYKSEEGVRVLLLIWDDKTSHDKVFLKTSGVMGTHDEETRKFFKHSSVVGTVFTHHQKCVIVDTQAAGNNRKITAFIGGLDLCDGRYDTPEHRLFRDLDTVFSGDFHNPTFPAGTRVPRQPWHDLHCRIEGPAAYDVLINFEQRWRKATKWKEFAILFKKASQWHDDSLIRIERISWILSPSISTSKDISNSKEKLDYTIVPEDDPLVWVSSEDDPENWHVQIFRSIDSGSLKGFPKNVDVALSQNLICAKNLVIDKSIQTAYIEAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKIACKIRAKERFAVYIVLPMWPEGDPKTGAMQEILFWQGQTMQMMYDVVAQELKSMKLTDVHPQDYLNFYCLGNREHFNEETSSANGAQISGAYKYRRFMIYVHAKGMIVDDEYVIIGSANINQRSMAGSKDTEIAMGAYQPHYTWASKKRHPYGQIYGYRMSLWGEHLGMLDETFEEPERVECVHKVNAIADNNWKLFVSEDFSLLQGHLLKYPVKVDSDGKIRSLPDCENFPDAGGKILGAHSTAIPDILTT 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03220 982 SUPERFAMILY Phospholipase D/nuclease 678 908 - -
Pste1g03220 982 SMART C2_3c 152 287 IPR000008 -
Pste1g03220 982 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 827 854 IPR001736 GO:0003824
Pste1g03220 982 SMART pld_4 473 508 IPR001736 GO:0003824
Pste1g03220 982 SMART pld_4 827 854 IPR001736 GO:0003824
Pste1g03220 982 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 149 313 IPR035892 -
Pste1g03220 982 PANTHER PHOSPHOLIPASE D 145 971 IPR015679 -
Pste1g03220 982 SUPERFAMILY Phospholipase D/nuclease 334 581 - -
Pste1g03220 982 CDD C2_plant_PLD 145 311 - -
Pste1g03220 982 Gene3D Endonuclease Chain A 353 591 - -
Pste1g03220 982 Pfam PLD-like domain 686 864 IPR025202 -
Pste1g03220 982 Pfam C2 domain 151 290 IPR000008 -
Pste1g03220 982 Gene3D Endonuclease Chain A 647 876 - -
Pste1g03220 982 MobiDBLite consensus disorder prediction 112 139 - -
Pste1g03220 982 Pfam Phospholipase D Active site motif 473 508 IPR001736 GO:0003824
Pste1g03220 982 Pfam Phospholipase D C terminal 901 971 IPR024632 -
Pste1g03220 982 Gene3D C2 domain 149 320 IPR035892 -
Pste1g03220 982 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 473 508 IPR001736 GO:0003824
Pste1g03220 982 ProSiteProfiles C2 domain profile. 132 288 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03220 Pste-Chr1 14647580 14656464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03220 146 818 Phospholipase D Gene Family (Wang group) AT4G35790 68.143 0.0 990