Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03213 ATGTTGGGTGAGACTTGGTCGGGCGACATACAAAGGGAGAAGACAAGAATGTTTGAGTGGTTATCAATGGGACAAAACGCGACGAGTGAGAAAATAGCTGCCTTGGTCTCTACGATGAATGCGGCAATGGAATGCGCTCGGGGTATAGCAGCTCGTTCTGGTGAGATAGAAAAGTCATCAAGCATGATTTGCACCTCCTTGGCCAAGTTGGAATCTGCCCTCAATTCAGACTCATTAGGAGAAGTTGGCCATACTGCTAAGTTATTTGGGCCAGAAAATGATCACGAGTCTACAACGTGCCAGGGAATCCGCAAGAGTAAACCATTTCAGACTCATGATCAAATTCCCAACAAAAAGGCCAAACCCTCAAATGACCCCAATGATATCTCTGATGAGGATGACAAGATTAATCTATTTGACAATGAGTCCAAGGGTATTAGACCCCTCAATGATCCTGACAACTTTCATTCAGTGCCGAGATTAACTAATGTTGGGATGGAACAATTTCCAACTCCTTTGGCCATGCATATACCAATGAACACCCTAAAACTCGATTCACATGCCAGATGGTTTTATTATGACAGGTACAGGGGACATCATCTGACAATGAAAGACCCTGCGTCTAATAGGAAGGCATTATCAATGTCCAAATTCGACCCTACAGATGATATGCAACTAACTGCTGAGATGAAAGTATGTGCATACGTGTTTAGCCCTGACAACCCTCCAGGTGAGGTTCTACTAAGGATTGGAGACGCATCTGCTACAACAAGAGACATTGAGTGTCTTTGCTCAGGAATGATGATTGAAGATAAGATATACTTGACCATTAAGGATGGGGAACATTGGTATTCGGTGGTTGTTTCATTGGAAGAGCGAATTGTACATCACCTAGACTCGTGCTTTCATGTGGGACAATGTTATGTCTTGGCTCAAATGATATCATCAGAATACTTTCCACAAGATTATCTGAGTAGCCTACAAAAAATAAGGTGGTGGGAGATCGTGGACACAAAGGGAATATCAAGCTGTGAACAAAGCGCCATGACCAAACCCAACTCTTTCTTTCACAATCTCATCAAGCCCTTCAAACTCAGTTCCAGTAAAGAGGAAGAAAACCAAGACGACTTACAGAGCATAACTTCACAGGAGCAGAAGATCTTCCCCTACGAAACATTGGTTGCTGCTACTAACAAATTTCACATTCTTAACAAGCTGGGTGAAGGAGGATTTGGACCCGTTTTTAAGGGGAAATTGAATGATGGGAGAGAGATTGCAGTGAAGAAATTATCGCATAGATCGAATCAAGGGAAGACACAGTTCATTAACGAGGCAAAGTTATTGTCTCGTGTGCAGCACCGTAATGTGGTGACTTTGTTCGGTTATTGTACCCATGGCTCTGAGAAGCTTCTTGTTTATGAGTATGTCCCTCGCGAGAGCCTCGACAAGCTTCTCTTCAAATCCCAGAAGAAAGAGCAGCTAGATTGGACACGTAGATTTGACATAATCAGTGGGGTGGCAAGGGGATTGATATATCTTCACGAAGACTGTCACAATTGCATAATCCATCGTGACATAAAGGCAAGCAACATCTTACTTGATCAAAAATGGGTGCCCAAGATTGCAGATTTTGGCCTCGCGCGCCTCTTCCCCGAGGACCAAACCCACGTCCAAACACGTGTGGCTGGAACCAACGGGTATCTGGCTCCGGAGTATTTAATGCATGGGCATTTGTCGGTGAAGGCAGACGTATTTAGCTATGGGGTTTTGGTGTTGGAATTGGTTAGTGGCCAGAGAAATTCATCCTTTGATATGGACGTGAGTGCACAGAATCTCCTAGACTGGGCATACAGGCTATACAAGAAGGGTAGGGCCTTAGAGATCGTGGACCCTACATTGGCCTCTTCAGTGGTAACTGAACAAGTAGAAATGTGCATTAAACTGGGTCTGCTCTGCACTCAAGGTGATCCACAATTACGCCCAACCATGGGGCGTGTAGTGGTGATGTTGTCAAAGAAACCAGGCCACATGGAAGAACCAACAAGACCAGCAATACCGGGTTCCAGATACAGAAGAGTACCTCGCAGACCCTATGCAATGTCTTCTGGTTCTGGGGCTGATGATGATGACTCTAAGTCACACACTTTTGATTCAAGCAACTCTGGCACTAACACTACATCTGCAACTGCAACTGCAACAACAAGCTCCAATATTACTGCAGAGGTTGACCGGCGAGGGAAACGACCAATGCAAGGTTGAGTACATAATTAGTTTTCTCATTGATTTTAATGTCATGAATTTTGTGATGTAAGTAAATAATGATTGATGTAAATTTTACGAGTAGGGAAATTTTTTCAGTGCCACTGGGGTATGCTTTTCTTTGTCCTTCTTGTAAAAATATAAAAAATTACTAAATGAAAAATATAACTGCAAAAAGCAGCTAAGGTGGGGG 2452 0.4352 MLGETWSGDIQREKTRMFEWLSMGQNATSEKIAALVSTMNAAMECARGIAARSGEIEKSSSMICTSLAKLESALNSDSLGEVGHTAKLFGPENDHESTTCQGIRKSKPFQTHDQIPNKKAKPSNDPNDISDEDDKINLFDNESKGIRPLNDPDNFHSVPRLTNVGMEQFPTPLAMHIPMNTLKLDSHARWFYYDRYRGHHLTMKDPASNRKALSMSKFDPTDDMQLTAEMKVCAYVFSPDNPPGEVLLRIGDASATTRDIECLCSGMMIEDKIYLTIKDGEHWYSVVVSLEERIVHHLDSCFHVGQCYVLAQMISSEYFPQDYLSSLQKIRWWEIVDTKGISSCEQSAMTKPNSFFHNLIKPFKLSSSKEEENQDDLQSITSQEQKIFPYETLVAATNKFHILNKLGEGGFGPVFKGKLNDGREIAVKKLSHRSNQGKTQFINEAKLLSRVQHRNVVTLFGYCTHGSEKLLVYEYVPRESLDKLLFKSQKKEQLDWTRRFDIISGVARGLIYLHEDCHNCIIHRDIKASNILLDQKWVPKIADFGLARLFPEDQTHVQTRVAGTNGYLAPEYLMHGHLSVKADVFSYGVLVLELVSGQRNSSFDMDVSAQNLLDWAYRLYKKGRALEIVDPTLASSVVTEQVEMCIKLGLLCTQGDPQLRPTMGRVVVMLSKKPGHMEEPTRPAIPGSRYRRVPRRPYAMSSGSGADDDDSKSHTFDSSNSGTNTTSATATATTSSNITAEVDRRGKRPMQG 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03213 752 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 369 728 - -
Pste1g03213 752 Pfam Protein kinase domain 400 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03213 752 SUPERFAMILY Cysteine proteinases 235 309 IPR038765 -
Pste1g03213 752 MobiDBLite consensus disorder prediction 716 740 - -
Pste1g03213 752 FunFam Cysteine-rich receptor-like protein kinase 10 364 475 - -
Pste1g03213 752 FunFam Cysteine-rich receptor-like protein kinase 10 477 682 - -
Pste1g03213 752 ProSiteProfiles Protein kinase domain profile. 400 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03213 752 SUPERFAMILY Protein kinase-like (PK-like) 384 689 IPR011009 -
Pste1g03213 752 Gene3D Phosphorylase Kinase; domain 1 362 475 - -
Pste1g03213 752 SMART serkin_6 400 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03213 752 MobiDBLite consensus disorder prediction 672 752 - -
Pste1g03213 752 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Pste1g03213 752 Gene3D Transferase(Phosphotransferase) domain 1 476 681 - -
Pste1g03213 752 PIRSF TyrPK_CSF1-R 397 481 - -
Pste1g03213 752 PIRSF TyrPK_CSF1-R 477 741 - -
Pste1g03213 752 PIRSF TyrPK_CSF1-R 25 78 - -
Pste1g03213 752 MobiDBLite consensus disorder prediction 105 135 - -
Pste1g03213 752 CDD STKc_IRAK 406 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03213 Pste-Chr1 14610102 14621080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03213 380 685 Receptor kinase-like Gene Family AT4G11530 50.974 7.85e-105 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g03213 Pkinase 2.7e-50 CL0016