Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03193 AAAAATCACCATAAAGGGCATGGATCCAAGTCCCTGGCTGATACACTGGCTAGATGGAAAGAATATAATACCCGGCTGGAGTCTAGTGAGGCTGAGAAGCCAGTCAGAAAGGTTCCTGCCAAGGGATCAAAGAAGGGGTGTATGAAAGGCAAAGGAGGGCCTGAAAACTCACGTTGTAACTACAGAGGAGTTAGGCAAAGGACTTGGGGAAAGTGGGTGGCTGAAATCCGGGAACCAAACAGAGGGAGTAGGCTCTGGTTGGGTACTTTTTCCACTGCCATTAGCGCTGCTCTAGCTTATGATGAAGCCGCAAGGGCAATGTATGGTTCTTGTGCACGCCTCAACTTTCCCAATGTTCAAGTTTCAACTTTATCCGAAAAATCGTTAAGAAATTCTCCAGCTGATAATCAATCTGATTCTGCATCGATGATATTAGAGAATTCTGAGTGCATGATATTGCCAAACAGATATGGGGGAGATGCAGTTGAAGATGATGACATGGATGGACTTACCTTATCCTTAAGTGTGAAGCACGAGGAAGGGGAGGGTGAATCAGGGACCAGTTCTTCCTATCCTTCATTTACCGGGATATCAGCTGTTGTAAAATTTACTTGGTGGAAAAGTGTTGCATTCTTCTGGTACTGGTCTGATGCAAATTGTGGATATCCAATCAAGTTGGAAGATGTGAAA 690 0.4464 KNHHKGHGSKSLADTLARWKEYNTRLESSEAEKPVRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFSTAISAALAYDEAARAMYGSCARLNFPNVQVSTLSEKSLRNSPADNQSDSASMILENSECMILPNRYGGDAVEDDDMDGLTLSLSVKHEEGEGESGTSSSYPSFTGISAVVKFTWWKSVAFFWYWSDANCGYPIKLEDVK 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03193 230 Gene3D AP2/ERF domain 60 119 IPR036955 GO:0003700|GO:0006355
Pste1g03193 230 CDD AP2 59 119 IPR001471 GO:0003700|GO:0006355
Pste1g03193 230 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Pste1g03193 230 PRINTS Ethylene responsive element binding protein signature 83 99 IPR001471 GO:0003700|GO:0006355
Pste1g03193 230 ProSiteProfiles AP2/ERF domain profile. 60 117 IPR001471 GO:0003700|GO:0006355
Pste1g03193 230 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 3 149 - -
Pste1g03193 230 SMART rav1_2 60 123 IPR001471 GO:0003700|GO:0006355
Pste1g03193 230 MobiDBLite consensus disorder prediction 26 59 - -
Pste1g03193 230 FunFam Ethylene-responsive transcription factor 2 59 118 - -
Pste1g03193 230 Pfam AP2 domain 59 109 IPR001471 GO:0003700|GO:0006355
Pste1g03193 230 SUPERFAMILY DNA-binding domain 60 117 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03193 Pste-Chr1 14492264 14493068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03193 4 117 AP2-EREBP Transcription Factor Family AT2G40350 60.504 7.20e-49 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pste1g03193 AP2 4.6e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02849 3 21212912 21220072 Pste1g03193 1 14492264 14493068 PCT