Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03172 CAAAAAAGAGAACATACTCAAATTGTCATGGCTGCATTCTTGAATTTGATCATCTTGTTTTCAGTATTCTCTACAGGCAAGTCACTGAGCTTAAACTACTACGAAAAAACATGCCCTAAGCTGGAGTGCATTGTCGCTAAAGCAGTGAAGGATGCCACTGCTAAGGACAAAACCGTTCCAGCAGCACTTCTGCGAATGCACTTTCATGATTGTTTCATTCGGGGGTGCGACGCCTCTGTGCTGCTAAATTCAAAAGGAAACAACAAAGCAGAAAAAGATGGGCCACCAAATGTTTCTTTGCATGCATTCTATGTCATTGATGCAGCAAAGAAAGCAGTAGAATCTTCATGCCCTGGTGTGGTCTCTTGTGCTGATATCCTTGCTCTAGCAGCAAGGGACGCAGTTTATCTGTCTGGAGGACCTAGATGGGATGTTCCTAAAGGAAGAAAGGACGGTAGAACATCTAAGGCCAGCGAAACCATACAATTACCAGCACCAACTTTCAACTTATCACAACTGCGGCAAAGCTTCTCTCAAAGAGGACTGTCAGGGGAAGACCTAGTAGCTCTGTCAGGGGGCCATACATTGGGTTTCTCCCACTGCTCATCTTTCAAAAACAGAATCCACAACTTCGATGCTACACATGATGTTGACCCTTCATTAAATCCATCATTTGCAGCAAAACTGAAATCAATTTGTCCACTAAAATCTCAGGCAAAAAATGCAGGCACCACTATGGACCCTTCAACAACAACTTTTGACAATACATATTACAAGTTGATCCTCCAACAGAAAGGTCTGTTTTCTTCTGATCAAGTTTTGCTGGATAACCCAGACACCAAAAATCTGGTTACAAAGTATGCCACCTCACAAAAGGCATTTTTTGAGGCTTTTGCAAAGTCCATGGTCAAAATGGGCAGTATCAACGGTGGACAGGAGGTTAGAAAGGACTGCAGGGTGATCAATTAA 969 0.4293 QKREHTQIVMAAFLNLIILFSVFSTGKSLSLNYYEKTCPKLECIVAKAVKDATAKDKTVPAALLRMHFHDCFIRGCDASVLLNSKGNNKAEKDGPPNVSLHAFYVIDAAKKAVESSCPGVVSCADILALAARDAVYLSGGPRWDVPKGRKDGRTSKASETIQLPAPTFNLSQLRQSFSQRGLSGEDLVALSGGHTLGFSHCSSFKNRIHNFDATHDVDPSLNPSFAAKLKSICPLKSQAKNAGTTMDPSTTTFDNTYYKLILQQKGLFSSDQVLLDNPDTKNLVTKYATSQKAFFEAFAKSMVKMGSINGGQEVRKDCRVIN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03172 322 FunFam Peroxidase 164 305 - -
Pste1g03172 322 CDD secretory_peroxidase 29 321 IPR033905 GO:0004601|GO:0042744
Pste1g03172 322 Pfam Peroxidase 45 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste1g03172 322 ProSiteProfiles Plant heme peroxidase family profile. 28 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste1g03172 322 Gene3D Peroxidase, domain 2 164 305 - -
Pste1g03172 322 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste1g03172 322 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste1g03172 322 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste1g03172 322 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste1g03172 322 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste1g03172 322 FunFam Peroxidase 32 176 - -
Pste1g03172 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Pste1g03172 322 Gene3D - 32 322 - -
Pste1g03172 322 PANTHER PEROXIDASE 25-RELATED 19 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste1g03172 322 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste1g03172 322 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste1g03172 322 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste1g03172 322 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste1g03172 322 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste1g03172 322 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste1g03172 322 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste1g03172 322 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste1g03172 322 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pste1g03172 322 SUPERFAMILY Heme-dependent peroxidases 29 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03172 Pste-Chr1 14362436 14363745 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03172 11 321 Peroxidase AT5G42180 66.879 6.03e-157 440