Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03170 GAATGTCAGAAGGTTCGGTGCTATATTGTGAATATGATCCTGTTAGTCCTTCTTCCTCTTCCCTCCCCATTTTGGCTTTCTCATTCATGGAAGTTTGCTGCTGCAACCTTGAAGTGGATGTAAATGGCGAAGAGACTTTCATGGTGGACAAGACTGTAATTACTCAGTACTCAAATAAATTTGCTAGATTATTTGGAAAGTCTAGTGGTGCCACAGGAAAGCTTAAAGTAATATTCCACGATTTTCCAGGAGGTGCAGAAGGTTTTGAGCTTATGTTAAGATTCTGTTACAACAATGGAACAGCTGATGTAAGTCCTTCCAATTTGTTTCTAGCGCGTTGTGCTGCTGAGTACATGGAAATGAAAGAACCTGTCGCTGACATTTCTAACTTACTGGAGCAAACAGAGAAATCACTCCAAGAGATTAGCTGTTGGACTTGGTCAGATCTTTTAATTGGTTTGAAGCAGTGCCAGAATTTACTAGTTCCAGATTCTTCTGTGATGGTAGAGAGATGCTTGGATACTATTGTGGGGAGGCTGGTTTTGGCTAGTGAAGCAAGTCCTTGTCCATCAACTAGTTCCACTGACAGTTCTTGGGTTCGGTTTTCATGTGACTCAAAGAGCACTGAGAGTGCAAAAACAAGTTCCTCTCGTTTAACATGGTGGTTTGAAGATCTCCTATTTTTGATTCCCTTGTTGGTTGCAATGTTGGTTAAGTCTATGCTTTCGCGTAAGATGGACCATATTGTTATCAGCAGGTTTCTTCTGTATTATCAGAAGGCCAAATTTTCTACTTCTAGTACAGATGAGAAGATCAAGATCATAGAAATGGTCATAGATATGCATTATGAAATGGATCAAAGTTGTGTTCCTTGCAAGACTTTGTTTGGGATTCTGAGGGTTACTTTGGCTTTGAACATAAGCAAATGTAGCAGGAATAAGTTGGAGACTATGGTTGGCTCCCAATTGGATCAAGCAACCTTGGACAATTTGCTTGTTCCTTCTCCTTATGGAATAAGCTACTTGTATGATGTGAACCTTGTTTTGAGATTTTTGAAGGCATTTTTGCGGCGAGGAAATGGTCTAGTCACTCCCATTCGGATGAGAAAAGTTGCTATCTTAATAGATATGTATATAGCAGAAATAGCTCCTGACCCTTGTTTGAAAACTTCAAAGTTCTTGGCTCTTGCCACAGCAATTCCAGACTCTGCAAGAGATTCTTATGATGAGCTCTACCATGCAATGGACATATACCTTGAGGTACATGCTCGATTGTCCCAGGAAGAAAGATTGAAGATATGCTGTGGTTTAAATTATGAGAAGCTTTCACCTCAAGCATGCCTACACCTTTCTCAGAACAAAAAGTTTCCTTCAAAATCTGCAGTCCAGGCTCTTATCTCTCAACAATCTAAGCTAAAAAATTTACTTCATGTCACTCCCTGTACAAGTTCATACAATGATTCACCTTGCAGCTCCAGTAGTGCTGCTCATAAGGGGAAGAAAGAAAAAACCAGTGAACAAGTTGTGCTGTATGCTGGCAATTTTGATCTCTCTACAGATAATGAGAAACTCAAAGCACATTTACAAGGAATGCAGTGGAGGGTCATGGAATTAGAGAAATTCTGTAGGAAAATGCAAATACAAATGGCAAAGATCACAAAATCAAAAGCATCAGGCCATAGTTATCCAAAATCTTTGCCAAAGCTTTGCTCATGAGTCATGACACATTTTTGGATTTTGATTATTTTCCTTTTGTATTTTTCATATCTGTATAGCACAGGAATGAGTTGTGTCTGTAGCTTCTAAGCTTTTCCGCGTAACTAAGAACAGTGATATTGATTGTACAGTCATGCAATAATGGAAGAGACTTTCAGATTAGAGTGTGGACCCTGTATAACAAACATATCATGTTC 1912 0.3923 MSEGSVLYCEYDPVSPSSSSLPILAFSFMEVCCCNLEVDVNGEETFMVDKTVITQYSNKFARLFGKSSGATGKLKVIFHDFPGGAEGFELMLRFCYNNGTADVSPSNLFLARCAAEYMEMKEPVADISNLLEQTEKSLQEISCWTWSDLLIGLKQCQNLLVPDSSVMVERCLDTIVGRLVLASEASPCPSTSSTDSSWVRFSCDSKSTESAKTSSSRLTWWFEDLLFLIPLLVAMLVKSMLSRKMDHIVISRFLLYYQKAKFSTSSTDEKIKIIEMVIDMHYEMDQSCVPCKTLFGILRVTLALNISKCSRNKLETMVGSQLDQATLDNLLVPSPYGISYLYDVNLVLRFLKAFLRRGNGLVTPIRMRKVAILIDMYIAEIAPDPCLKTSKFLALATAIPDSARDSYDELYHAMDIYLEVHARLSQEERLKICCGLNYEKLSPQACLHLSQNKKFPSKSAVQALISQQSKLKNLLHVTPCTSSYNDSPCSSSSAAHKGKKEKTSEQVVLYAGNFDLSTDNEKLKAHLQGMQWRVMELEKFCRKMQIQMAKITKSKASGHSYPKSLPKLCS 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03170 570 PANTHER OS12G0117600 PROTEIN 35 547 IPR043454 -
Pste1g03170 570 ProSiteProfiles NPH3 domain profile. 219 470 IPR027356 -
Pste1g03170 570 SMART BTB_4 34 135 IPR000210 GO:0005515
Pste1g03170 570 Gene3D Potassium Channel Kv1.1; Chain A 24 145 IPR011333 -
Pste1g03170 570 ProSiteProfiles BTB domain profile. 34 98 IPR000210 GO:0005515
Pste1g03170 570 SUPERFAMILY POZ domain 16 130 IPR011333 -
Pste1g03170 570 Pfam NPH3 family 219 446 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03170 Pste-Chr1 14360307 14364156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03170 46 550 EF-hand Containing Proteins AT3G44820 26.937 9.58e-55 194