LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste1g03145	ATGGGAAGCCAGAGTTACTTAAAGGTTTTGATCATCTGTCTTGCAGCATTGATTGGAGCAACTCAAGCTCAATTGCAGCTTGGTTACTATGAAAAAACCTGCCCAAATGCTGAGAAGATCGTTTTGAAGTATGTTCTTGAGCATATCAACAATGCCCCATCACTAGCAGCTGCTCTCATCAGACTACACTTCCATGATTGCTTTGTCAATGGTTGTGATGGATCAGTGCTTCTGGATTCAACACCAGGGAATCAAGCTGAAAAGGACTCTATTCCAAATCTTACACTACGAGGCTTTGGCTTCATTGAAACAATAAAGAGCCTTATTGAAACTGAATGTCCTGGTGTAGTCTCTTGCGCAGATATCTTGGCTTTGACCACCAGAGACGCTGTTAATGCCATTGGAGGACCCTTTTGGAATGTTCCAACAGGAAGAAGGGATGGACTCATCTCAAGAGCAGCAGATCCTCTACAGAACCTTCCTGCTCCATTTCACAACCTTACCGTCCAACTAACACTCTTTTCCAATGTTGGCCTTGATGCAAACGATCTTGTCTTACTTGTTGGTGCTCACACAATTGGTGTTGCCCATTGCTCATCAATTGCAAATCGCCTATATAATCATACGGGCAAGGGTGACACAGACCCAAAACTAGATACTGAATATGCAATAAATCTAAAGACTCGTAAGTGCAAAAGCATTAATGATAACACCACACTTCTTGAGATGGATCCTGGAAGTCGCAACACATTTGATCTTAGCTATTATAAACAAGTGGTTAAGAGAAGGGGTTTATTCGAATCAGATGCTGAATTGCTCACTAGTCCTATCACAAGTGCCATTATTGCCAAACAACTTCAATCAACTCAAGGATTCTTTGTGGAATTTGCCAAATCCATGGAAAAACTGGGACGAATTAATGTCAAGATGGGAACAGAAGGAGAGATAAGAAAACATTGTGCACGAGTAAATAATTAA	978	0.4121	MGSQSYLKVLIICLAALIGATQAQLQLGYYEKTCPNAEKIVLKYVLEHINNAPSLAAALIRLHFHDCFVNGCDGSVLLDSTPGNQAEKDSIPNLTLRGFGFIETIKSLIETECPGVVSCADILALTTRDAVNAIGGPFWNVPTGRRDGLISRAADPLQNLPAPFHNLTVQLTLFSNVGLDANDLVLLVGAHTIGVAHCSSIANRLYNHTGKGDTDPKLDTEYAINLKTRKCKSINDNTTLLEMDPGSRNTFDLSYYKQVVKRRGLFESDAELLTSPITSAIIAKQLQSTQGFFVEFAKSMEKLGRINVKMGTEGEIRKHCARVNN	325

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste1g03145	325	CDD	secretory_peroxidase	24	323	IPR033905	GO:0004601\|GO:0042744
	Pste1g03145	325	PRINTS	Haem peroxidase superfamily signature	244	259	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Pste1g03145	325	PRINTS	Haem peroxidase superfamily signature	56	70	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Pste1g03145	325	PRINTS	Haem peroxidase superfamily signature	183	198	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Pste1g03145	325	PRINTS	Haem peroxidase superfamily signature	117	134	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Pste1g03145	325	PRINTS	Haem peroxidase superfamily signature	135	147	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Pste1g03145	325	FunFam	Peroxidase	28	169	-	-
	Pste1g03145	325	Gene3D	-	28	324	-	-
	Pste1g03145	325	ProSitePatterns	Peroxidases active site signature.	56	67	IPR019794	GO:0004601
	Pste1g03145	325	PANTHER	PEROXIDASE 25-RELATED	15	317	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste1g03145	Pste-Chr1	14207324	14211056	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste1g03145	14	325	Peroxidase	AT1G05260	64.217	2.29e-152	429

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