LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste1g03122	ATGTCCAGCACTGCGGGTGTTGTGATCCCATGCAAAGCTGCTGTAGCATGGGAAGCGGGGAAACCTTTGGTTATAGAACGTGTGGAGGTGGCTCCTCCACAGGAGATGGAAGTGAGGATCAAAGTCAAATACACCTCGCTTTGCCATACTGATCTTTACTTCTGGGAGGCCAAGGGGCAAACTCCTTTGTTTCCACGAATTTTCGGCCATGAGGCAGCTGGAATTGTGGAGAGTGTTGGAGAAGGAGTCTCAGATCTGTGTGTTGGGGACCATGTGCTCCCTGTGTTCACTGGGGAATGTGGTGAGTGTGCACATTGCAAATCTGAGGAAAGCAACATGTGTGACCTGTTGAGAATTGATACAGACAGAGGAGTCATGCATAGTGATGGAAAAAGTAGGTTCTCCATTAATGGTACCCCAATAAACCACTTTGTTGGCACATCCACTTTTAGTGAATACACTGTGATACATTCTGGCTGCCTAGCTAAGATCAATCCAAAAGCACCTATGGATAAAGTTTGTGTCCTCAGTTGCGGCATCTCAACAGGATTAGGAGCAACTTTAAATGTAGCAAAACCAAAGAAGGGCTCTATAGTAGCAGTCTTTGGTCTTGGAGCTGTTGGCCTTGCTGCTGCTGAGGGAGCAAGAATTGCTGGTGCATCTAGAATTATTGGAATTGATTTGAACCCAAACAGGTTTGAGGAAGCCAAAAAATTTGGAGTAACTGAGTTCCTGAATCCCAAGGACTTTGATGTACCAATTCAAAAGGTTATTGCAGACGTAACAAATGGAGGAGTGGATAGAAGTATAGAGTGTACTGGAAACATCAATGCTATGATATCCGCTTTTGAATGCGTTCATGATGGGTGGGGTGTTGCTGTGCTTGTTGGAGTACCCAACAAGGACGCAGTTTTCATGACCAAGCCCATTAATTTGCTCAATGAAAGAACACTCAAGGGAACTTTCTTTGGAAATTACAAGCCCAGGACTGACCTCCCTTCTGTAGTTGAAATGTATATGAACAAGCAATTGGAATTGGACAAGTTTATAACCCATAGAGTTCCTTTCTCTGATATCAACAAGGCATTTGATTTAATGTTGAAAGGAGAGGGACTAAGGTGCATCATTAGCATGGAAGACTAAAACAAATGTTACCGAATTTTATCCTTTTCCTTTCCTTACTAAGACTCATTCCCTATGTATTTAATTACAATGTAATAAATGGGA	1227	0.4295	MSSTAGVVIPCKAAVAWEAGKPLVIERVEVAPPQEMEVRIKVKYTSLCHTDLYFWEAKGQTPLFPRIFGHEAAGIVESVGEGVSDLCVGDHVLPVFTGECGECAHCKSEESNMCDLLRIDTDRGVMHSDGKSRFSINGTPINHFVGTSTFSEYTVIHSGCLAKINPKAPMDKVCVLSCGISTGLGATLNVAKPKKGSIVAVFGLGAVGLAAAEGARIAGASRIIGIDLNPNRFEEAKKFGVTEFLNPKDFDVPIQKVIADVTNGGVDRSIECTGNINAMISAFECVHDGWGVAVLVGVPNKDAVFMTKPINLLNERTLKGTFFGNYKPRTDLPSVVEMYMNKQLELDKFITHRVPFSDINKAFDLMLKGEGLRCIISMED	380

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste1g03122	380	Gene3D	-	19	370	-	-
	Pste1g03122	380	Pfam	Alcohol dehydrogenase GroES-like domain	37	161	IPR013154	-
	Pste1g03122	380	CDD	alcohol_DH_plants	9	376	-	-
	Pste1g03122	380	ProSitePatterns	Zinc-containing alcohol dehydrogenases signature.	69	83	IPR002328	GO:0008270\|GO:0016491
	Pste1g03122	380	Gene3D	-	183	321	-	-
	Pste1g03122	380	Pfam	Zinc-binding dehydrogenase	206	334	IPR013149	-
	Pste1g03122	380	SUPERFAMILY	GroES-like	328	376	IPR011032	-
	Pste1g03122	380	SUPERFAMILY	GroES-like	4	187	IPR011032	-
	Pste1g03122	380	PANTHER	ALCOHOL DEHYDROGENASE	8	376	-	-
	Pste1g03122	380	FunFam	alcohol dehydrogenase 1-like isoform X1	19	182	-	-
	Pste1g03122	380	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	169	342	IPR036291	-
	Pste1g03122	380	FunFam	Alcohol dehydrogenase class-P	183	321	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste1g03122	Pste-Chr1	14086629	14090447	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste1g03122	22	181	Monolignol Biosynthesis Gene Families	AT4G37970	30.864	4.10e-11	61.6