Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03071 ATGTTCAGTAAAAAATATGGAGATGGAATTTCAAATCCTGTGTTTCTGAAGTCTCCAGATAACACTGAATGGAAAATATATTGGACAAAGCATGATGGTGAGATTTGGTTTCATAAGGGTTGGAAGGAGTTTGCCTCATACTATTCTCTTGATCATGGACACTTGTTGTTCTTTGAATATGAGAGATCTTCGTATTTTGATGTGCACATATTTGACAATAGTGCCCTTGAAATAGACTATCCTTCCCAGGTTACTCATGATGGAAAGGACAACCCTGTGGAGATTAGTGATGATTCTGTTGAATGTTTGGATGGAAAGTTTTTCACGTCAACAGTGTCTTTTCCTCAACGTTGTCACAAAATGAAAAATAGCATAACTACAAATGTTATAAGAAATTCTAAAGTATTAAGCTTGCATCACCATGTCCAAAGTAGAAGTTGTAGATCTCAAGAGGAAAAATTTATGCAGGAAAGCGTAGAGGAAGATGAGGGTAAATGCACTTTTAACAGTGGATACTCAAAACTGGAGAAATTAACTTCTGATGCCTTAAAGAAAGCCATAACTTTCAGATCTGAACATCCCTCTTTCTTACTTGTCATGAAGCCATCCTTTATTAATGGAGATTATCTGGAAATTCCACCCCATTTTGTAGAAAAATATTTGAAGATTAGACAATCAGTTGTCACCCTTGAGACCTTGGATGGAAGAACTTGGCCTGTTATATATGCTGCTCCTAGATTTACTGGGGGGTGGCAGAAATTTATATCAGAAAATAATTTGAATGTAGGGAATGTTTGTGTTTTTGAACTGATCCACAAGATCCAGGGCCTTGCTTTCAAAGTTTTCATCTTTCGAGGTGCAGTGGAACCAACTTGCCCCATTTCACAGGGTAACTAA 897 0.3701 MFSKKYGDGISNPVFLKSPDNTEWKIYWTKHDGEIWFHKGWKEFASYYSLDHGHLLFFEYERSSYFDVHIFDNSALEIDYPSQVTHDGKDNPVEISDDSVECLDGKFFTSTVSFPQRCHKMKNSITTNVIRNSKVLSLHHHVQSRSCRSQEEKFMQESVEEDEGKCTFNSGYSKLEKLTSDALKKAITFRSEHPSFLLVMKPSFINGDYLEIPPHFVEKYLKIRQSVVTLETLDGRTWPVIYAAPRFTGGWQKFISENNLNVGNVCVFELIHKIQGLAFKVFIFRGAVEPTCPISQGN 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03071 298 CDD B3_DNA 2 72 IPR003340 GO:0003677
Pste1g03071 298 SMART B3_2 196 287 IPR003340 GO:0003677
Pste1g03071 298 SMART B3_2 2 74 IPR003340 GO:0003677
Pste1g03071 298 Gene3D - 1 75 IPR015300 -
Pste1g03071 298 ProSiteProfiles B3 DNA-binding domain profile. 1 74 IPR003340 GO:0003677
Pste1g03071 298 ProSiteProfiles B3 DNA-binding domain profile. 195 287 IPR003340 GO:0003677
Pste1g03071 298 SUPERFAMILY DNA-binding pseudobarrel domain 2 74 IPR015300 -
Pste1g03071 298 SUPERFAMILY DNA-binding pseudobarrel domain 190 285 IPR015300 -
Pste1g03071 298 PANTHER B3 DOMAIN-CONTAINING 2 280 - -
Pste1g03071 298 Pfam B3 DNA binding domain 199 285 IPR003340 GO:0003677
Pste1g03071 298 Pfam B3 DNA binding domain 4 73 IPR003340 GO:0003677
Pste1g03071 298 CDD B3_DNA 194 285 IPR003340 GO:0003677
Pste1g03071 298 Gene3D - 175 287 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03071 Pste-Chr1 13756324 13757403 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03071 2 285 B3 DNA Binding Superfamily AT3G18990 29.653 3.28e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pste1g03071 B3 6.6e-15 CL0405