Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03059 ATGGGCATCTGTTTCTCCGCCACCAAGGTCAGCGGTTCCAACAGCAACAACGCCGGCACCTCCAACCGCAACCGGAAATGTTCCTCCGCGCCGGCACCGCCGCTTCCGATTGCGGAGCCAGTGACTGCGTCCAAGCACCAGTCTTCTCAGGGTCAACGCCGGCGAATGTCGGAGGACGCGTCTAAGCATCCACGCGCCAAAGAGAAAGCGAGTGGACGTAGACAAGGGGCGCATGTTCCGTGTGGAAAGCGTACGGATTTCGGGTACGAGAAAGACTTCGACAAGAGATTCTCGCTTGGGAAATTGTTGGGACATGGACAATTCGGTTATACTTACGTCGGAATAGACATAGCAAATGGGGATCGTGTCGCCGTTAAGAGACTCGAGAAGAGCAAGATGGTTCTCCCCATAGCGGTTGACGATGTTAAGCGAGAAGTCAGGATATTGAAAGAACTTACAGGCCATGAAAATGTTGTTCAGTTCTATAATGCTTTTGAGGATGATTCATATGTGTACATAGTTATGGAGTTATGTGAGGGCGGAGAACTGCTAGATCGGATATTGGCCAAGAAGGACAGTCGTTATACTGAAAAGGATGCTGCTGTGGTTGTAAGACAGATGCTTAAGGTTGCGGCTCAGTGTCATTTACATGGTTTGGTACACCGGGACATGAAACCAGAGAATTTTCTTTTCAAGTCAAACAAAGAAAATTCACCTTTAAAGGCTACCGATTTTGGTTTGTCTGATTTCATAAAACCTGGAAAGAGGTTTCAAGATATTGTTGGCAGTGCATACTATGTTGCACCAGAAGTGTTAAAGCGTAAGTCAGGTCCTGAGTCTGATGTATGGAGCATCGGTGTGATTACATACATATTGCTTTGTGGTAGACGTCCATTTTGGGATAAGACAGAGGATGGTATCTTCAAGGAGGTCTTAAGGAACAAGCCTGATTTCCGGCGGAAACCATGGCCAACCATAAGCAATGCTGCAAAAGATTTTGTGAAGAAATTGTTGGTAAAAGATCCCCGAGCAAGATATACTGCTGCTCAGGCTCTATCACATCCATGGGTTAGAGAAGGAGGAGAGGCATTAGAGATTCCTATTGATATATCTGTCCTGAACAACATGCGACAGTTTGTGAAGTATAGTCGGTTGAAACAATTTGCACTAAGGGCATTGGCTAGCACACTTAATGAAGGAGAGTTGTCTGATCTAAAAGATCAGTTTGATGCAATAGATGTGGACAAAAATGGTTCTATTAGTCTTGAAGAGATGAGACAGGCTCTTGCTAAAGATCTCCCTTGGAAGTTGAAAGAATCACGTGTGCTAGAGATATTGCAAGCGATAGACAGCAACACAGATGGGCTAGTGGATTTCACTGAGTTTGTGGCGGCTACATTACATGTACATCAATTAGAGGAACATGATTCTGACAGGTGGCAACAAAGGTCACAGGCTGCTTTTGAGAAATTTGACTTGGATAAGGATGGCTATATTACTCCTGATGAACTTAGAATGCATACGGGTTTGAGAGGCTCGATTGATCCATTACTTGAGGAAGCTGATATCGATAAAGATGGCAAAATCAGCTTATCAGAATTTCGTAGACTTCTAAGAACTGCAAGCATTGGTTCACGACATGTAATGAGCCCGGGTCACCATCTTCGAAAGATCTAG 1677 0.449 MGICFSATKVSGSNSNNAGTSNRNRKCSSAPAPPLPIAEPVTASKHQSSQGQRRRMSEDASKHPRAKEKASGRRQGAHVPCGKRTDFGYEKDFDKRFSLGKLLGHGQFGYTYVGIDIANGDRVAVKRLEKSKMVLPIAVDDVKREVRILKELTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAQCHLHGLVHRDMKPENFLFKSNKENSPLKATDFGLSDFIKPGKRFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFVKKLLVKDPRARYTAAQALSHPWVREGGEALEIPIDISVLNNMRQFVKYSRLKQFALRALASTLNEGELSDLKDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFTEFVAATLHVHQLEEHDSDRWQQRSQAAFEKFDLDKDGYITPDELRMHTGLRGSIDPLLEEADIDKDGKISLSEFRRLLRTASIGSRHVMSPGHHLRKI 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03059 558 ProSiteProfiles EF-hand calcium-binding domain profile. 479 514 IPR002048 GO:0005509
Pste1g03059 558 ProSitePatterns EF-hand calcium-binding domain. 522 534 IPR018247 -
Pste1g03059 558 PANTHER SERINE/THREONINE-PROTEIN KINASE 75 531 - -
Pste1g03059 558 Pfam Protein kinase domain 99 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03059 558 Pfam EF-hand domain pair 403 466 IPR002048 GO:0005509
Pste1g03059 558 Pfam EF-hand domain pair 485 538 IPR002048 GO:0005509
Pste1g03059 558 MobiDBLite consensus disorder prediction 1 83 - -
Pste1g03059 558 Gene3D Transferase(Phosphotransferase) domain 1 183 377 - -
Pste1g03059 558 SMART serkin_6 97 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03059 558 Gene3D - 398 467 - -
Pste1g03059 558 MobiDBLite consensus disorder prediction 51 74 - -
Pste1g03059 558 SMART efh_1 404 432 IPR002048 GO:0005509
Pste1g03059 558 SMART efh_1 513 541 IPR002048 GO:0005509
Pste1g03059 558 SMART efh_1 483 511 IPR002048 GO:0005509
Pste1g03059 558 SMART efh_1 441 469 IPR002048 GO:0005509
Pste1g03059 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Pste1g03059 558 ProSiteProfiles EF-hand calcium-binding domain profile. 400 435 IPR002048 GO:0005509
Pste1g03059 558 ProSiteProfiles Protein kinase domain profile. 97 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03059 558 ProSiteProfiles EF-hand calcium-binding domain profile. 437 472 IPR002048 GO:0005509
Pste1g03059 558 ProSiteProfiles EF-hand calcium-binding domain profile. 517 544 IPR002048 GO:0005509
Pste1g03059 558 CDD STKc_CAMK 96 356 - -
Pste1g03059 558 FunFam CDPK-related kinase 1 90 182 - -
Pste1g03059 558 FunFam calcium-dependent protein kinase 28-like 183 376 - -
Pste1g03059 558 ProSitePatterns EF-hand calcium-binding domain. 450 462 IPR018247 -
Pste1g03059 558 Gene3D - 378 537 - -
Pste1g03059 558 SUPERFAMILY Protein kinase-like (PK-like) 94 369 IPR011009 -
Pste1g03059 558 MobiDBLite consensus disorder prediction 7 28 - -
Pste1g03059 558 ProSitePatterns EF-hand calcium-binding domain. 492 504 IPR018247 -
Pste1g03059 558 ProSitePatterns EF-hand calcium-binding domain. 413 425 IPR018247 -
Pste1g03059 558 FunFam Calcium-dependent protein kinase 18 365 542 - -
Pste1g03059 558 SUPERFAMILY EF-hand 386 540 IPR011992 -
Pste1g03059 558 Gene3D Phosphorylase Kinase; domain 1 90 182 - -
Pste1g03059 558 ProSitePatterns Protein kinases ATP-binding region signature. 103 126 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03059 Pste-Chr1 13656649 13662131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03059 1 555 EF-hand Containing Proteins AT2G17890 74.609 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste1g03059 Pkinase 2.4e-68 CL0016