Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03057 TCCTTATGTGGTTGCATACAAAGGGTGTGACATCACCAATGAGAACAACAAGCTCTTGTTTAACCTCTTTATGGAGAACATGCCCTTCGAAACGCTTGCTCAAGCAACTTATGGAGGGGCTAGAGTACTTACATTCCAGAGAGTTGGTGCATTATGACATCAAGGGTGCTAACATCTTAATCGATGAAGATAGGGCAAAAATTGGTGACTTTGGGTGTGCAAAAAGTGTGGAGGATTCCACAGCAGCGATCACTGACACGCCGATGTTCATGGTGTTGGAGGAGCAAGGGTATGCTAGTGATATTTGGTCACTTAGGTTCATTGTAGTTGAAATGGCCATTGGTGGTGCCCCATGGCCTAACATTGCAGACCTTTTTTCACTATTTTATCATATTGCATATTCTAATGAAGTGCCTCACATTCCTTCTTTTCTATCTAAGGAAGCAAAGGATTTCTTGGAGAAGTGCTTGAATAGGAATCCACAAGAAAACTGGAGGACTAGTGAACTCTTGAAGCATCCATTTATTGAGAAATTATGTTTGAATATGGCGCGTTTGGAATCCAATTCAAGTTCTCCAACCAATACTTTTGGAGTTGCTCAGAAAGTTTGGGCAGCTTTGTTCACACTACTTTTGAAATTTTGGCTGCATGAAGAGTCAGAATGTTGGCTTTGTCTTCAGGGGAGCCCTGTTAGGGAAGACATCATGATGAAAATTAGATCACATGCAGAGGGATTGGAGTTGAAGGTTTTGAGATCAAATTCCCCAACTCACAAACCCTCTTTTCCACATGTGAACCACCCTTCCATTGCTGACAAAAAATCTAAGCCACCAAAATTAGGCCACGTTGACAACTTTAGAGAGAGAATAAAGGATAAAGACATGGAGTGGCATAGAGGCCACACCATAGGCCACGGTGCATCAGCCACCGTCTCTACTGCCACATGTCGGGGTGGTGTCTTCGCTGTCAAGTCATCGGAGCTGCCACGATCAAAGCCTTTAAAAAAGGAGCAAAACATTTTGTCCTCTCTAAGTAGTCCTTATGTGGTTGCATACAAAGGGTGTGACATCACCATGGAGAACAACAAGCTCTTGTTTAACCTCTTCATGGAGTACATGCCCTTCGGCACGCTTGCTCAGGCAACTCGCCGATGCGATGGTGGCCGGCTCAACGAGCTGACAATCGCATGCTACACGAGGCAAATTGTGGAGGGACTAGAGTACTTGCATTCCAAAGGGTTGGTGCATTGTGACATCAAGGGTGCCAACATCTTAATCGGTGAATATGGGGCCAAAATTGAGTGTGGAGGATTCCACGGCGCAATCGGTGGCACGCCGATGTTCATGGCGCCGGAGGTGGCACGTAGGGAGGAGCAAGGGTGTGCTAGTGACATTTGGTCACTTGGGTGCACTATGGTTGAAATGGCCACTGGTGGTACCCCATGGCCTATTGTGGCAGACCCTTTTTCAATGCTTTATCATATTGCATATTCTAATGAAGTGCCTCAGATTCCTTCTTTTCTATCTAAGGAAGCAAAGGATTTCTTGGGGAAGTGCTTGAATAGGAATCCAAAAGAGAGGTGGAGGGCTAGTGAACTTTTGAAGCATCCATTTATTGGGAAATTATGTTTGAATAAGGAGGGTTTGGAATCCAATTCAAGTTCTCCAACCAGTGTTCTTGAGCAAGGCTTTTGGAGTTGCGTGGAAGAGTCAGAAAGTTTTGGCAATTTGGTTCACACTACTTTTGAAATTTCGGCTGCATGGAGGATCAGAATGTTGGCTGTGTCTTCACGGGTGCCTTGTTGGGGAAGACATCATGATGAAAATTGGATCACAGCCAGAAGTATTAGAGTTGAAGGTTTTGGGAATTGTGGGACAGGGACAACTTCTACTAGTCGTGAATTGTCTCAT 1910 0.4476 MWLHTKGVTSPMRTTSSCLTSLWRTCPSKRLLKQLMEGLEYLHSRELVHYDIKGANILIDEDRAKIGDFGCAKSVEDSTAAITDTPMFMVLEEQGYASDIWSLRFIVVEMAIGGAPWPNIADLFSLFYHIAYSNEVPHIPSFLSKEAKDFLEKCLNRNPQENWRTSELLKHPFIEKLCLNMARLESNSSSPTNTFGVAQKVWAALFTLLLKFWLHEESECWLCLQGSPVREDIMMKIRSHAEGLELKVLRSNSPTHKPSFPHVNHPSIADKKSKPPKLGHVDNFRERIKDKDMEWHRGHTIGHGASATVSTATCRGGVFAVKSSELPRSKPLKKEQNILSSLSSPYVVAYKGCDITMENNKLLFNLFMEYMPFGTLAQATRRCDGGRLNELTIACYTRQIVEGLEYLHSKGLVHCDIKGANILIGEYGAKIECGGFHGAIGGTPMFMAPEVARREEQGCASDIWSLGCTMVEMATGGTPWPIVADPFSMLYHIAYSNEVPQIPSFLSKEAKDFLGKCLNRNPKERWRASELLKHPFIGKLCLNKEGLESNSSSPTSVLEQGFWSCVEESESFGNLVHTTFEISAAWRIRMLAVSSRVPCWGRHHDENWITARSIRVEGFGNCGTGTTSTSRELSH 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03057 635 SUPERFAMILY Protein kinase-like (PK-like) 294 564 IPR011009 -
Pste1g03057 635 SMART serkin_6 295 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03057 635 ProSiteProfiles Protein kinase domain profile. 295 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03057 635 ProSiteProfiles Protein kinase domain profile. 1 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03057 635 SUPERFAMILY Protein kinase-like (PK-like) 29 178 IPR011009 -
Pste1g03057 635 Pfam Protein kinase domain 28 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03057 635 Pfam Protein kinase domain 296 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g03057 635 Gene3D Transferase(Phosphotransferase) domain 1 14 200 - -
Pste1g03057 635 ProSitePatterns Protein kinases ATP-binding region signature. 301 322 IPR017441 GO:0005524
Pste1g03057 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
Pste1g03057 635 CDD STKc_MAPKKK 294 537 - -
Pste1g03057 635 Gene3D Transferase(Phosphotransferase) domain 1 288 572 - -
Pste1g03057 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Pste1g03057 635 MobiDBLite consensus disorder prediction 253 280 - -
Pste1g03057 635 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 283 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03057 Pste-Chr1 13631243 13635627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03057 293 566 MAP Kinase Kinase Kinase AT2G32510 49.831 2.34e-88 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pste1g03057 Pkinase 5.8e-43 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03057 1 13631243 13635627 Pste1g03057 1 13631243 13635627 ECH
Pste1g03057 1 13631243 13635627 Pste6g04387 6 33117638 33122419 ECH