Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03028 CTTTGTTTTGAGTCCATCATGGAACCTCAACAACCACAAGGGAACCAACCAAACGAGGATGGTGGCAGTGGAAAAGGAGGGTTTCTTAGCAGGCAAAGTAGTACACGGTGGACTCCCACAACCGACCAGATAAGAATATTGAAGGACCTTTACTACAACAATGGAATTAGATCCCCGAGTGCAGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGTAAGATTGAAGGCAAGAATGTCTTTTATTGGTTCCAGAACCACAAAGCTCGAGAACGGCAGAAGAAAAGGTTCACTTCTGATAATGTGCCCATGCAAAGACCCCCAACTAATGCTGCTGCTTGGAAACCTGATCAAGACCCCATTCACACCAAGTATTGTACCATTCCTTCTACTGGGATCTCTTCCGCATCATCTTCTTCTGTTGAGATGGTTACTGTGGGGCAGATGGGGAATTATGGGTATGGTTCTGTGCCCATGGAGAAAAGTTTTAGGGATTGCTCAATATCAGCTGGAGGTAGCAGCGGCCATGTTGGAATAAACCACAACCTGGGATGGGTCGGTGTGGACCCTTATTCCTCAGCCTATGCAAACTTATTTGACAAAATAAGGCCAACTGGAGAAACCCTGGAAGAAGAACAAGAAGAGGATGGTTCTGCTGAGATTGAAACCCTCCCTTTATTCCCCATGCACGGTGATGACATCCATGGCTATTGCAACCTCAGGTCTAATTCTTATAACTATGATGGAAATGGCTGGTATCATGCTGAAGATGGCTTCAAGAACGGTTCTCGTGCTTCTTTGGAGCTCAGTCTCAACTCCTACACTCGCAGATCTCCAGATTTCGCTTAAGTACTCATCCACATATATATACTAATCAAACTTATTAATTATAAGATTATAATGATAGCCTTCTTAATTGGTTATCATTCTATGATTAATTGTACCTAGC 955 0.4408 LCFESIMEPQQPQGNQPNEDGGSGKGGFLSRQSSTRWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDNVPMQRPPTNAAAWKPDQDPIHTKYCTIPSTGISSASSSSVEMVTVGQMGNYGYGSVPMEKSFRDCSISAGGSSGHVGINHNLGWVGVDPYSSAYANLFDKIRPTGETLEEEQEEDGSAEIETLPLFPMHGDDIHGYCNLRSNSYNYDGNGWYHAEDGFKNGSRASLELSLNSYTRRSPDFA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03028 284 SMART HOX_1 32 100 IPR001356 GO:0003677
Pste1g03028 284 SUPERFAMILY Homeodomain-like 28 102 IPR009057 -
Pste1g03028 284 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 14 279 IPR044555 GO:0003700|GO:0099402
Pste1g03028 284 MobiDBLite consensus disorder prediction 95 119 - -
Pste1g03028 284 CDD homeodomain 35 97 IPR001356 GO:0003677
Pste1g03028 284 MobiDBLite consensus disorder prediction 1 39 - -
Pste1g03028 284 Gene3D - 29 95 - -
Pste1g03028 284 ProSiteProfiles 'Homeobox' domain profile. 30 96 IPR001356 GO:0003677
Pste1g03028 284 Pfam Homeodomain 34 95 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03028 Pste-Chr1 13476573 13478223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03028 28 235 Wox Gene Family AT2G17950 46.586 8.54e-55 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pste1g03028 Homeodomain 1.7e-17 CL0123