Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03018 GAACCCTCAAACCTAAACACGCGAACAAAACTTCCAGACCCTTCGGTCGTGGGACCCACGTGACAAGCGTCCATCGCAACCGTCCATTATTAAAGCCTTTCTTAATCGCGACCGCCAAAAAATATTACAATAAATATAAATAGATATGCCGGAGTAATTGTAGTTTAGGGTGTTGCTTCTTCTTTTTGTTAATTTGGATCTAGACTCTAGAGTCTTCACTTCACGCTCTCTTTTTCCCTCTCTGAAACTAGGGTTTTCATATTCTTAGAATTAAAACATGTTCGGAAGGGGGGCACCGAAGAAGAGCGACAATACACGCTACTACGAAATCCTTGGCGTCTCGAAGAACGCTTCGCAGGATGATCTGAAGAAGGCTTACAAGAAAGCCGCCATTAAGAATCACCCCGACAAGGGTGGTGATCCCGAGAAGGCTTATGAGGTTCTTAGTGACCCCGAGAAGCGTGAGATATATGATCAGTACGGTGAGGATGCGCTTAAGGAAGGAATGGGTGGCGGCGGCGGCCACGATCCCTTTGATATCTTTTCATCATTCTTTGGTGGTGGAAGTCCGTTTGGATCAGGTGGAAGCAGTCGAGGTAGGAGACAGAGACGTGGAGAAGATGTGGTTCACCCTCTCAAGGTCTCTCTGGAAGACCTTTACCTTGGAACTTCTAAGAAGCTCTCGCTTTCCAGAAATGTCATATGTTCCAAGTGCAGTGGAAAAGGTTCTAAGTCTGGGGCTTCGATGAAGTGTGCTGGTTGTCAAGGAACTGGTATGAAGGTTTCTATCAGGCACCTTGGTCCAACCATGATTCAGCAGATGCAGCACCCTTGCAATGAATGTAAGGGTACTGGGGAAACCATCAATGATAGAGACCGCTGCCCACAGTGCAAGGGAGAAAAGGTTGTGCAGGAGAAGAAAGTTCTTGAAGTTATTGTGGAAAAAGGAATGCAGAATGGGCAAAAGATTACATTCCCTGGTGAAGCTGATGAAGCGCCGGACACAATTACTGGGGATATCGTCTTTGTTCTTCAGCAGAAGGAACATCCCAAATTTAGAAGAAAGGCTGAAGACCTTTTTGTGGAGCATACTCTGTCCCTTACAGAGGCCTTATGTGGGTTCCAGTTTGTGCTCACTCACTTGGATAGCCGTCAGCTTCTTATAAAATCAAACCCCGGTGAAGTGGTGAAGCCTGATTCATACAAGGCTATAAATGACGAGGGAATGCCCATATACCAGAGGCCATTCATGAAGGGAAAGCTTTACATTCACTTCACAGTGGAATTCCCAGATTCTCTAAATCCTGAGCAGGTCAAGGCCCTAGAGGGTGTTCTGCCTCCAAAGCAACCCTCACAATTGACAGATATGGAGCTGGATGAATGTGAGGAAACAACGCTTCATGATGTTAACATGGAGGAGGAGACTAGGAGGAAGCAACAGCAATCTCAGGAGGCGTATGAGGAGGATGATGACGTGCCAGGTGGTGCACAGAGGGTACAATGTGCCCAGCAGTAATGACTTTGTGGAAGATAGAATCAGAATGATGATGAAAATGCTTAGTTTCATGTCTGGTGATACTGTTGATGTTCCATAACCTTAGTGTGGACTAAAGATGAGTAGTTTGATGAAAAATGATTGTGAGAAAATGAACAATGTACTACTTGCTTTTATTACTGTTAAAGAGATACTATCCGATTGGCATCCTAGATACCTTAACTGTTAGTATTTGTTGGTTATTCTTTTTAAAATCTGTTAGTATTTGTTGGTTATTCTTTTTAAAATCTGT 1787 0.4426 MFGRGAPKKSDNTRYYEILGVSKNASQDDLKKAYKKAAIKNHPDKGGDPEKAYEVLSDPEKREIYDQYGEDALKEGMGGGGGHDPFDIFSSFFGGGSPFGSGGSSRGRRQRRGEDVVHPLKVSLEDLYLGTSKKLSLSRNVICSKCSGKGSKSGASMKCAGCQGTGMKVSIRHLGPTMIQQMQHPCNECKGTGETINDRDRCPQCKGEKVVQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTITGDIVFVLQQKEHPKFRRKAEDLFVEHTLSLTEALCGFQFVLTHLDSRQLLIKSNPGEVVKPDSYKAINDEGMPIYQRPFMKGKLYIHFTVEFPDSLNPEQVKALEGVLPPKQPSQLTDMELDECEETTLHDVNMEEETRRKQQQSQEAYEEDDDVPGGAQRVQCAQQ 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03018 412 MobiDBLite consensus disorder prediction 373 393 - -
Pste1g03018 412 FunFam DnaJ subfamily A member 2 143 209 - -
Pste1g03018 412 SUPERFAMILY HSP40/DnaJ peptide-binding domain 109 267 IPR008971 GO:0006457|GO:0051082
Pste1g03018 412 CDD DnaJ_C 114 341 - -
Pste1g03018 412 Gene3D - 257 339 - -
Pste1g03018 412 CDD DnaJ 15 58 IPR001623 -
Pste1g03018 412 FunFam Chaperone protein dnaJ 3 210 250 - -
Pste1g03018 412 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 140 212 IPR036410 -
Pste1g03018 412 ProSiteProfiles Zinc finger CR-type profile. 130 214 IPR001305 GO:0031072|GO:0051082
Pste1g03018 412 Gene3D DnaJ domain 11 103 IPR036869 -
Pste1g03018 412 MobiDBLite consensus disorder prediction 373 412 - -
Pste1g03018 412 Pfam DnaJ C terminal domain 117 338 IPR002939 -
Pste1g03018 412 CDD DnaJ_zf 143 209 IPR001305 GO:0031072|GO:0051082
Pste1g03018 412 SUPERFAMILY HSP40/DnaJ peptide-binding domain 260 349 IPR008971 GO:0006457|GO:0051082
Pste1g03018 412 PRINTS DnaJ domain signature 34 49 IPR001623 -
Pste1g03018 412 PRINTS DnaJ domain signature 61 80 IPR001623 -
Pste1g03018 412 PRINTS DnaJ domain signature 16 34 IPR001623 -
Pste1g03018 412 Gene3D - 143 209 - -
Pste1g03018 412 Pfam DnaJ domain 15 66 IPR001623 -
Pste1g03018 412 Gene3D - 104 255 - -
Pste1g03018 412 FunFam Chaperone protein dnaJ 3 284 355 - -
Pste1g03018 412 Pfam DnaJ central domain 143 209 IPR001305 GO:0031072|GO:0051082
Pste1g03018 412 ProSiteProfiles dnaJ domain profile. 14 69 IPR001623 -
Pste1g03018 412 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 12 394 IPR044713 GO:0006457|GO:0030544
Pste1g03018 412 SMART dnaj_3 13 61 IPR001623 -
Pste1g03018 412 SUPERFAMILY Chaperone J-domain 9 104 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03018 Pste-Chr1 13397704 13400540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03018 15 68 C2H2 Transcription Factor Family AT1G74250 39.130 1.23e-07 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03018 1 13397704 13400540 Pste1g03018 1 13397704 13400540 ECH
Pste3g02960 3 22358679 22361479 Pste1g03018 1 13397704 13400540 PCT