Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03003 CACCAAATACTAATAGAGAACTCATCGATATCAATTGAGGATGATGATTTTGAGCAGAGTTCCCAAAAGTGTAAATTAAGAGGAAACGAGTTTGATGCCAAAAGATTGAAAATTGAAGGTGAAAATAAGGGTTATGTGTTAGCACCTAGAAGTAGAAATGTGAGAGAGCTGGCTAGAGTTGTAGTTCAAACAACCAATGACATTGATATTCTAGATGATGGATATAGATGGAGAAAATATGGACAAGAAGTAGTGAAGGGCAATCCAAATCCA 273 0.359 HQILIENSSISIEDDDFEQSSQKCKLRGNEFDAKRLKIEGENKGYVLAPRSRNVRELARVVVQTTNDIDILDDGYRWRKYGQEVVKGNPNP 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03003 91 Gene3D WRKY domain 58 91 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste1g03003 91 SUPERFAMILY WRKY DNA-binding domain 63 91 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste1g03003 91 Pfam WRKY DNA -binding domain 72 91 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste1g03003 91 ProSiteProfiles WRKY domain profile. 66 91 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste1g03003 91 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 19 91 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03003 Pste-Chr1 13295055 13295455 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03003 8 91 WRKY Transcription Factor Family AT2G38470 56.044 1.90e-21 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste1g03003 WRKY 1.4e-05 CL0274