Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03000 CAAAGCCACCATCTACAAGGAACCATGATTGATATGGATTTACTCCTACAAATATTTAATGACTCAACAATGATCGTCAAATTAATTGAGGAGCCTAGAACTGCTTCCACCATTGGCAATACACCCTCAAATATTTTAAATATACCTCTTTTTATTCTAAGCCTAGGTTTTCCCCCTCTCTCTCTCTCTCTGCGCCAATTACACAGATCCTGTCACTTTCGATCTCCTACCCCTCCCAGATTCACTATGAACCCTCAAAAGAAAATCAACAGGGTCTCCTGGGCCCCTCCATCCAGTCTCTGTCAGGTAAAATTATTCTTATCTGAGGATTCTCCTTCAGAAGTTAGCAAGAAACATCAATATCATCTTCAAGCAAATACATTCTTAGCATGGCTTTCATCAACTACTAATGACGAAGATGATGATTTATTACCACCTGGTTTTGAACACAATCGTTTCCAGAATCGATCAAAGGCTGAATCATCTCACACTTTTGAAACTAAATGGGAATACCCTCCTTCGGTAATGAGATTAAAGGTTGCTTTGAGTTCTAATTGGTGCGTAGCGGTTGGTGATGAAAGTAAAGAGAAATATGCTGAAAAGCAAAGAGAAAAGCATGTACTTGAAGCAATTTATCCTCGTAATTCTGACATTCCTGCTAGCCCTTATGCTTGTGTTGATGTGGAGACGGAAAGTTATGATGATAGCCTCACTCCTCTAATTCCATTAGAGGAAGAAGTGGCACTAGAAAGCGGTGGACAGGCATCGTCAACACTTGTGACATCAGAGGAGGCAGGCATAGTTTCAGCTTTTGCTACCATTATAGCTGCCATTTTGAAAGGCACTGAGGAGGAAGAGAACAAGATTAACGCCGATTTTCTGCTCCAAATAGCTAAGGACCCAATCACGGTTGCAAAAATAGTTGAAAAATATAAAGCTGCCATGACCACTGCATCCTCAAGGACTCCTGAAACGGCTCCTGCATCTGGTAAGGTGGCAACAACTCATGACTCAGTTACAAGACCTCCATCTCCACAACCAGGGGTAAAGCGAGGAGCATCACCAGAAACTGAAAGGAGCAGTTTCAGCAGGTCAGATGCTGATTCCAAATCATTTGTTGTCAAAGATATCAACTATTATAAGAGCCTTATTACAGCACATGGTTCTCTAAGGAATCGTAACCATCATCGAGATTTCAAACGCTCACGTAGCGACGCCGACCAGGACAAACTCAAAATTCAGAAACCATGCAAATACTTCAAAACTTCAAGGGGCTGCCGCACCGGTTCCAACTGCCCTTATCTGCATGATTCATCAGTGTGGAGGATGTAA 1332 0.4212 QSHHLQGTMIDMDLLLQIFNDSTMIVKLIEEPRTASTIGNTPSNILNIPLFILSLGFPPLSLSLRQLHRSCHFRSPTPPRFTMNPQKKINRVSWAPPSSLCQVKLFLSEDSPSEVSKKHQYHLQANTFLAWLSSTTNDEDDDLLPPGFEHNRFQNRSKAESSHTFETKWEYPPSVMRLKVALSSNWCVAVGDESKEKYAEKQREKHVLEAIYPRNSDIPASPYACVDVETESYDDSLTPLIPLEEEVALESGGQASSTLVTSEEAGIVSAFATIIAAILKGTEEEENKINADFLLQIAKDPITVAKIVEKYKAAMTTASSRTPETAPASGKVATTHDSVTRPPSPQPGVKRGASPETERSSFSRSDADSKSFVVKDINYYKSLITAHGSLRNRNHHRDFKRSRSDADQDKLKIQKPCKYFKTSRGCRTGSNCPYLHDSSVWRM 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03000 443 MobiDBLite consensus disorder prediction 315 342 - -
Pste1g03000 443 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 371 439 - -
Pste1g03000 443 MobiDBLite consensus disorder prediction 315 365 - -
Pste1g03000 443 ProSiteProfiles Zinc finger C3H1-type profile. 411 439 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03000 Pste-Chr1 13283055 13294098 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pste1g03000 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03000 1 13283055 13294098 Pste1g03000 1 13283055 13294098 ECH
Pste7g01651 7 15360663 15364919 Pste1g03000 1 13283055 13294098 ECH
Pste1g03000 1 13283055 13294098 Pste7g01651 7 15360663 15364919 PCT