Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02996 ATCACAAACCACCGCTCCTGTTAACCAATACCAACACTTAAATCAGTAACTGAATATTCGATCGGAGATGTCTGCCGCCGGAGAAGAAAACGCAACAGCCGTGGAAAAACCGGTGGAGGAAGTGAAGGCGCCGGAGCCTGAGAAGGAGAAGAAACCTAAGGCTCCGAAGGAAAAGAAGCCAAAACAGGCCAAAACTGCCTCTCATCCTCCATATCTTCAAATGATCGAGGAGGCTTTGATGGCACTGAACGAGAAGGGAGGGTCGAGTCCGTATGCGATAGCGAAGTACATGGAGGAGAAGCACAAGGCGGTGCTGCCTGCGAATTTCAAGAAGATTCTCGGTCTTCAACTGAAGAACCAAGCCGCGAGGGGGAAACTCGTCAAGATCAAGGCTTCGTATAAGTTATCTGAAGCGGGGAAGAAGAAGAAGGAAGCTACGACGAAGGCCAAGGCAGAGAAAAAGGAATCGCGTCCGAAACGAAGCAAAAGAGCAACCGCGGCTGCTCCCAAGAGCAAGAAAAGCGACGCTGTTAAAAAGGCTTCGAAGAAGAGGACAAAGAAGGTGTCCACACCAGCGAAGCCCAAGCAACCCAAGTCCATAAAGTCTCCGGCCAAGAGGGCCCGAAAAGCTGCGGCCTGATGTTTGATATTTTTCTTCGTTTAGGGAAAACTCTGTATGTATGTATATATGAAAGGGTTTGTGTCTGTCTTGCTGCACAATCTTGAAGACAGTTGTGTAGTGTGGGGTACTAGATAGTTTAGTGCTATGCAGTCTTTGCATAATAATGGAGATAAATTTTACTGTTTTCAA 811 0.476 MSAAGEENATAVEKPVEEVKAPEPEKEKKPKAPKEKKPKQAKTASHPPYLQMIEEALMALNEKGGSSPYAIAKYMEEKHKAVLPANFKKILGLQLKNQAARGKLVKIKASYKLSEAGKKKKEATTKAKAEKKESRPKRSKRATAAAPKSKKSDAVKKASKKRTKKVSTPAKPKQPKSIKSPAKRARKAAA 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02996 190 Coils Coil 113 133 - -
Pste1g02996 190 CDD H15 43 116 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pste1g02996 190 SUPERFAMILY "Winged helix" DNA-binding domain 42 126 IPR036390 -
Pste1g02996 190 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 45 115 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pste1g02996 190 Pfam linker histone H1 and H5 family 46 112 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pste1g02996 190 MobiDBLite consensus disorder prediction 112 190 - -
Pste1g02996 190 PRINTS Histone H5 signature 164 181 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Pste1g02996 190 PRINTS Histone H5 signature 59 76 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Pste1g02996 190 PRINTS Histone H5 signature 32 53 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Pste1g02996 190 PRINTS Histone H5 signature 131 145 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Pste1g02996 190 MobiDBLite consensus disorder prediction 154 169 - -
Pste1g02996 190 MobiDBLite consensus disorder prediction 11 42 - -
Pste1g02996 190 MobiDBLite consensus disorder prediction 1 50 - -
Pste1g02996 190 Gene3D - 40 137 IPR036388 -
Pste1g02996 190 SMART h15plus2 43 110 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pste1g02996 190 MobiDBLite consensus disorder prediction 112 153 - -
Pste1g02996 190 PANTHER HISTONE H1 21 186 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02996 33 113 Single Myb Histone (SMH) Gene Family AT1G72740 38.272 1.05e-08 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02996 1 13244646 13245547 Pste1g02996 1 13244646 13245547 ECH