Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02991 CAGAGAGCAGAGGCAGAAAAATAATCAAACTCCAACTAAACTCTCCAAAGTTCCAACTCAATCCCCTTTGAAAGCAAAAGGGTGGCTAGCTTTTGCTCCCCATGCCCCGCGATGATGGACACTTTGTCTAGCTAGACAGCACCCTTTTATCTACCACCATCCTTCTTCTCTCTTCAATTCCTCGTGTGAGCTAACCCAACCTTGTAGCTCCTCCTTTATCAATCATTAATAAGGAATGGATCTGTGAGTAAAACACAATCCGTGGGCGTATGGGAAACTGATATAGCTTCAGATCAAGACACATAAACAAGCAGAAAAGAAAACAAGGTTCTTTTTTTTGGTACGGCCAGTGATTTGTTTGACAGATATACATGGCGACGTACTTTCATGGCAGCAGTTCAGAAATCCCTTCGTCTGCTGAAGGGTTGCAGACACTTTACCTTATGAATCCAAACTACGTACCGTACTCTGACGCGGCACAACATCCAACGCAAAACATGCTCCTGGTCAATCCCAACACTAGTAACACTAGTCCCACTTCAGCCAACGCGCTCAACCTTGACAACTTCTCCCACGCGCCGCCACCTCCATCTCCCAGCAGCAACCATCGTCAACAACACCTGATTGGGGTAATCATTCCATCATCAAACATCCTTGGATCCAACGCTGCGGCTGAGGATCATTCTCGTCCTTCTTTCCTTGGACAGCACCATGAATTCTCCGGCTTCCACGGCGGTGCTGCCTCCACCTCAACAGCTACGGCAGCATCTCGTGGAAACTATAACTTATGGGGTTCCATGTTTGATCAATCTGCCTCGAATATCATGACAGCAACGACAACCACCCCATCTAATAACATGGGATTTGGTAGTGTCATGTCGACCCAGATTGGTTTTCATAGGCCTAATCATTTGTCACTAAGCCTTTCTTCCCAGCAAACACCGTATAGGTCTTCCTCCGGGGAGATTCATGCTATTTCTCCGGCGAGCCGCGTCGGTGATGATATGAGGGGTTTGCACAGCGGAGTTTCTAACATGCATAGTGTTGTTTTGGGTTCTAAGTATTTGAAAGCAACACAGGAGCTTCTTGATGAAGTTGTGAATGTGGGGAAGGGAATCTCCAAAGGGGAAGAATCTATAGAAGGGGCTAAGAAAGAGAAGATGAAAGGGAATATTGAATCCAGTTCTGGGGTTGGTGATGGTTCGAGCTCTAGAAGGGAGAATAACGATGGAGGCAAACAAGGTGAACTCAGCACTGCACAGAGACAAGAGCTTCAGATGAAGAAGTCCAAGCTTGTGACCATGCTCGATGAGCTTTGGGGATTTGGTATTGATTTCCAAGAATTTATGATTCGTGCACTCTACAAATGCAAGGGATTGATCTTGTGGAAAGTACTACTGTACTTGAGTATTCTATGGCTTACTACTTGGGGTGCGGTGTGGGTTATGGTTGAGCAAAGGTACCGACAGTATCACCACCAAATGCAAATTGTGATAACATCATTTGAGCAGGCAGCGGGTATTGGGGCGGCAAAGTCATACACGGCCCTTGCATTAAAGACAATATCAAAGCAATTCCGGTGTCTCAAAGATGCAATATCTTCACAAATCAAGACAACGAGCAAGACCTTAGGTGAAGATGATTGCTTAGGAGTTAAGGTAGAAGGTTCGAGGCTTAGGTTTGTTGATCATCAACTGAGACAACAACGTGTATTGCAACAGCTTGGGATGATCCAACACAATGCTTGGAGGCCCCAAAGAGGCTTGCCTGAACGCGCTGTTTCTGTTCTTCGTGCTTGGCTTTTTGAACATTTCTTGCATCCATATCCTAAGGACTCTGATAAGGTTATGCTTGCAAAACAAACTGGACTTACTCGTGGCCAGGTGTCTAACTGGTTTATAAATGCGCGAGTTCGGCTATGGAAGCCAATGGTTGAAGAAATGTACTTGGAAGAGGTGAAGCAAGAGCAGAATAATGGGTCACAAGATAACAACACAAATAGATCAAAAGAATCAAGCAAGGAGTTATGGTCAGAAGCTAATGCTGGTGCCCAAGAATCTGGTGGCATGAGACTTGATCAAATTAATGTTCTCCAATCAAAGGCAGAAAGCTTCAACAACCAAACCACTTCCCCAACAGATATCTCCAATTCTAATTCGCTGTCAACATCTGCGATGGGAGGAGGGTCCCTCCAATCTGGTTTCCATCTTGCTGATATGCAAAGTCCAAACAAGCCAAGAAGCACTTCTGAAATGCAAAACTCTCCTGGTAGTATCCTTACAGCGGACATGGAAATGAAGCCTCATGGAGAGATAAACACTAGAGAAGGAAACAACACAAAGTTTGGCATTGAAAACCATGGTGGTGGGGGCTTTGGAGCATTTCCCATGGAAGACATTGGAAGGTTTCATCATGTCACTGAGCAACTGGCTCCACGGTTTCATGGCAATGGTGTTTCTCTCACTCTTGGACTTCCACACAGTGAGAACCTTTCCCTCTCTGGAACACAACATGGATTCCTCTCACAGAATATGCACTTGGGAATGAGACCAACCACTGAAAATGAGTTTTGTGGTGCCATCAACACTCCACCTTCTTCACACTCAGGCACCAGTTATGAAAGCATTGACATTCATAACAGAAAGAGGTTTGCTGCACAGTTGTTGCGGGATTTCGTGGCCTGAGATTTGATAATTAACTAGCTAGCTAGCTAGGATAATGATGATATACCCATTTTTCTTTTTCTGATGTTGCAATATCCACAACACACAAAGCAGTTCAGAGTGTTTCGACACACTAACATAGCAGAAGAATAGCAACAGGAAGGAAAAAATAAATGATGATGCATATTATTGTTTGTGCAAACTGGAGCACTGGTTATGTGGCGTGCATGTCTCGGAGTGGGAGGGAAATAACTTGCTTCATGTATAAAGATGGAAACTAGCAGGGAGTTCAGATTTGCCTGTTTTGAATTAGTTCAATTAAATGATTCAAGTTGAATTGGGGTTGGATATTGTATGTGGTATTGGAAAAAGTAGCTAGGTACATAAAATGAATTGAATGATTTGTTTGGTTAGGTAATGTATATCTGGATTTGGACACTGGGAGTTATGCCTTACTTTGTAAAATTAATTATTCCTGCCTGCTGTACTTTTTA 3157 0.439 MATYFHGSSSEIPSSAEGLQTLYLMNPNYVPYSDAAQHPTQNMLLVNPNTSNTSPTSANALNLDNFSHAPPPPSPSSNHRQQHLIGVIIPSSNILGSNAAAEDHSRPSFLGQHHEFSGFHGGAASTSTATAASRGNYNLWGSMFDQSASNIMTATTTTPSNNMGFGSVMSTQIGFHRPNHLSLSLSSQQTPYRSSSGEIHAISPASRVGDDMRGLHSGVSNMHSVVLGSKYLKATQELLDEVVNVGKGISKGEESIEGAKKEKMKGNIESSSGVGDGSSSRRENNDGGKQGELSTAQRQELQMKKSKLVTMLDELWGFGIDFQEFMIRALYKCKGLILWKVLLYLSILWLTTWGAVWVMVEQRYRQYHHQMQIVITSFEQAAGIGAAKSYTALALKTISKQFRCLKDAISSQIKTTSKTLGEDDCLGVKVEGSRLRFVDHQLRQQRVLQQLGMIQHNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRGQVSNWFINARVRLWKPMVEEMYLEEVKQEQNNGSQDNNTNRSKESSKELWSEANAGAQESGGMRLDQINVLQSKAESFNNQTTSPTDISNSNSLSTSAMGGGSLQSGFHLADMQSPNKPRSTSEMQNSPGSILTADMEMKPHGEINTREGNNTKFGIENHGGGGFGAFPMEDIGRFHHVTEQLAPRFHGNGVSLTLGLPHSENLSLSGTQHGFLSQNMHLGMRPTTENEFCGAINTPPSSHSGTSYESIDIHNRKRFAAQLLRDFVA 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02991 770 CDD homeodomain 459 520 IPR001356 GO:0003677
Pste1g02991 770 Gene3D - 462 541 - -
Pste1g02991 770 SMART HOX_1 459 523 IPR001356 GO:0003677
Pste1g02991 770 MobiDBLite consensus disorder prediction 256 296 - -
Pste1g02991 770 FunFam BEL1-like homeodomain protein 9 462 524 - -
Pste1g02991 770 MobiDBLite consensus disorder prediction 47 64 - -
Pste1g02991 770 Pfam Homeobox KN domain 476 515 IPR008422 GO:0003677|GO:0006355
Pste1g02991 770 MobiDBLite consensus disorder prediction 530 566 - -
Pste1g02991 770 Pfam Associated with HOX 225 410 IPR006563 -
Pste1g02991 770 MobiDBLite consensus disorder prediction 580 605 - -
Pste1g02991 770 SMART prehox3 220 411 IPR006563 -
Pste1g02991 770 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 93 542 - -
Pste1g02991 770 SUPERFAMILY Homeodomain-like 460 525 IPR009057 -
Pste1g02991 770 ProSiteProfiles 'Homeobox' domain profile. 456 519 IPR001356 GO:0003677
Pste1g02991 770 MobiDBLite consensus disorder prediction 47 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02991 Pste-Chr1 13187345 13192769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02991 1 770 Homeobox Transcription Factor Family AT2G35940 40.194 6.26e-123 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pste1g02991 POX 5.6e-47 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02984 3 22589379 22593825 Pste1g02991 1 13187345 13192769 PCT