Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02983 AAAAATTTGCCATAATACAATAATTTATCCCTGGCCACCACCAGAACTGTTGAAAACAGAGCTTCTCTGTTCACAATCCGACAAACCATTTCTCTGTTCAGTGGCTCCGGTCGTAAATATTCCTCCAAGCTCCTGCTTTTTCTCAAGCCTTTTCCCCTTTCACTTCATTTGTTTTCTCATCAGAAAGAAAGAGAGAGAGAGAAACACCCCCCACACACAGAACATAGGAAGCTAAAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGCACATCACAGTTTCACACAGAACCTGAACATTAAACACAATCTCACTCTCGCCAATCCCACTTCACCTTCACCTTCACCACACCAACCTAAACCCTCTTCCTCTTTCGTTTTCCCCTTACTCTCTGCTACTTTCTCTCTCTACCATTTTCTCTGCACAAATGGAGGTCATAGTTCTCTACAAGCTTGAATCTCGTGGGATAGTGTAGTCCCCTCGAGACTTTTCGTTTCAACTTTGTCGCTCTCTCGCTCCTTCTTCTCACGCTCTCTTTCTCTCTCCCCCTTCCCTTTTACTCTCTCTACAACTTCCTCTGCCGGAGGATGGCCTGCCGGTGCCGGAAACTGACCGTCGTGAACTTGGATCCGGAGAGAAAACGAAGCGGCGGGTTGAGGACTAAACAGGCGGGGAGGGGATCGTGCCGTGGTAGTTAGTTTTTCGGGAATGTGCTTTTTGCTTTCTCTCTCTTTCTTCGTGAATGCTAGTGTGACTCCATTGCGTCGGAAAAAGGAAAATTTTTGACCGGTTTAGGAACCCCTTTTGCGTTAAACGAAATGGGGTTTTTGCTCAAAGAGGCTTTGAGGACTCTGTGCCCAAGGAATCGCTGGTCTTATGCTGTGTTCTGGAAGATCGGTTGCAATAATTCCAAGTTGGATGTGATTTTGATGCTTGTACTTTTTAGAAGGGGAGGGGGATCTTATGGGAGGTCCGTGTTTAGATTCTATTTCTGGGGTTGCTTCGTGTTCAAGATAAAGTCCACATTACTTGCTTCTGTTTGGGCTTATGTTCCGTTAACTGAGCATGGTTTACTTGGCAGACTGTTAATCTGGGAAGATTATTACTATGAACCCTTGCCATCTCCTTTCCCTTCACGAACTGTTGGAATATCTAATGTTCCTTATCAAGATGGGGAAGGATGCTGGTTATCTTCGGAGTCTCAGCAAGGGATTCAGGATGAGGACAGGGTCTGTGTATTGATTAACAAAATGATGGTGAATAATTCAGTCAGTATTGCTGGAGAAGGGATCGTTGGACGGGCAGCATTTACAGGAAACTATCAGTGGATTCTTTTGAACAATACTAGAGATGCATATCTACCTGAGGTATATCCTGAATTGCATTACCAATTTTCAGCTGGAATGCAGACGGTGGTAGTTATTCCTGTGCTTCCCCATGGGGTTGTTCAACTAGGTTCTTTCTTGCCAATAATGGAAGATATTGAATTTGTGAATGATGTAAAGAATTTGATCTTGCGATTGGGATGTGTATCTGGTGCCCTTCTATCTGAAGACTCTTCAACCAAAGTTTCTAATGAAAAAATTGCTGGATCTGTCACTGTTGATCCACCTGTCATTGCTTCGAACTGCATTCCCTTGGTGGCTAATAGTTCCAACCTAGTAACTAATTCTCTTGCTTCAAGGTCTGTAGCTCAGTCGCCTCATCCTCTAAGGGGAGAAATAAATAATTATCAGGGATCTGTATTGACATCTCAAACCCATAACTCAAACCAAATATTTGATAACATGTGCCAACCAAAGGCTCATTCAATGAAGAAGACACTTGTTGAGGCTGAAGCTAAAGCAATACCTGCAAATCTTAGTTCATGTATGCAACAGCATTCTGTTTATAATTGTAAATTTGCATTCAATGAATTACCTAATTTCAATCGATCAAATCTGAGTGACTGCAGCCTTAAATATATGGAACAGCAAACATCAGGTATTGGGAGACAGAGTCATGTTAATCATAACATGAATCCCTCAAGTACCTTAAATATGTCTCAACTGAAACCAGATGGAAGCAAAATTATTGAACAGAATCAGAGTTCAGGTAGCAGTTCATTACTTGGAGGAGTCCCTATATGTAGTGGGAGTGATCTTTTGAGGACAAATATAATTAACTGCTCAGTTTCCAATCCTCTGAAAGTATCCACTTCTGATTTTTCCAGGACACCCAAGGTTGGGTTTGGACTTCAAAATAACAATTCAATGACTAATGCTGGGCATTGTTCTGTGCCTAATTTCACTAATCAATCCGTTAACATTCCTGTTGATTTAAAGCATACTTTTGCTTCAACTGATCAAACAGTAGAAGATGATTTGCTTCAGGCTGCCCTTAAGCTTCCATCTCTTCATCTTGAGGAGCAAGTGCCTGTGGGTGTTCACATCCCTGGTGTTGTGGAAGATTGCCTCAATAAAGATGTTACTAGTCAAGAACATACAATGAAAATGAATGTTAAGCATGAAGAAGCCTATGCTCAACTTGCTTCAGGCGATGATCTCTTTGATGTGTTAGGTGTGGATTTAAAAAGGAGACTACTCAATGGAAACTGGAATAATTTGCTTGCCACTGATTCAGATGCCAACACAAAATATATAGATAAAAAGGCTACATGCATGAATTTGCAAGTTGTAGGTCCTGATAGTAGTTATTCAGTTAATGAAGCAATATCAGACAGTGACATCTTTTCTGGATCAGCTACTGACCACCTGTTAGATGCTGTGGTTTCTAAAGCTCAATCTGCTCTAAAACAGAATTCTGATGAAATATCTTGCAGGACAACATTGACAAGGATTAGTACTGCCTCTGTTCCCTCTCCTGCCTGCAAGCAGGTTATGCCTGATCATGTTGTTCCGAGGGGATTATTTGATTTTCCTAAGATGGGGGTTAAAACAGCTGCTGGGGAAACAAGTTCTCTTAGGTCTGGGTGTAGCAAGGATGATATTGGAAACTGCTCTCAAACTACTTCCATATATGGTTCTAAGCTTAGTTCATGGGTTGAGAGTGTTAGTAATGTGAAACGTGAAAGTAGTGTTTCAACTGGATACTCTAAGCGACCAGATGAAGTTTGCAAATCGAATCGGAAAAGACTTAAACCTGGAGAGAACCCTAGACCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGTTACGAGAAATTGTGCCAAATGGAGCAAAGTGTAGCATAGATGCACTTTTGGAGAAGACCATCAAGCATATGCTTTTCCTGCAAAGTGTTACAAAGCATGCTGACAAGCTGAAACAAACAGGGGAATCGAAGATTGTTAGTAAAGAAGGTGGATTACTATTAAAAGATAACTTTGAGGGAGGAGCTACATGGGCATATGAGGTTGGCTCAGAATCAATGGTTTGTCCAATCATTGTTGAGGATCTCAATCCTCCTCGGCAAATGCTAGTAGAGATGCTTTGTGAGGAACGGGGTTTCTTTCTGGAAATAGCTGACTTAATCCGAGGATTAGGTTTAACCATATTGAAGGGCGTCATGGAAGCTCGTAATGACAAGATTTGGGCACGCTTTGCTGTTGAGGCAAACAGGGACGTAACAAGGATGGAAATATTTATGTCACTGGTTCGTCTGTTGGATCAAACGGTGAATCTTCATCCAATGGAATTGATAACAACATGATGTTGTATCATTGTTTCCGACAGATACTGGCAACTGTTAGGCAATGATTTTATCTCGTACTTGTAGTTTGGTGGTCTAAATGGTGTTGGGAGCAAGAAATCCACTGTAAGGCCTAAGGTGCATGTAACTTCGTCTAACTGCTGTTTCACCTCAATTTGGAGGGGGATGAGTTTCGTTGGTGTGAAGAGCTTCTCAAATGCATTTGTTTTATCTACATGCATCATGCATGTTTCCCTCGGTCCACTCATGCATTCGTTTTGTGAGGCTTTGGCACTTGGTGTGATTCTGTTGTATAGATAAAGATATTGTAGGTGCAGGTCGTGCTTCACAATCAGGCTTATCCACGTGTTCCTCCTTTATGACCTTTTCTCTCCATCTTGTTTGTCTTCTTTGGAGTGGTGAATGCTGATATTTGTTATATAACATACCAATTTTATTAATATATGCTTTGTGTGGATTTTTTATAGCTTAGTTTTCTCTAAAAGAGTGAACCACTTTTTCA 4200 0.4126 MGFLLKEALRTLCPRNRWSYAVFWKIGCNNSKLDVILMLVLFRRGGGSYGRSVFRFYFWGCFVFKIKSTLLASVWAYVPLTEHGLLGRLLIWEDYYYEPLPSPFPSRTVGISNVPYQDGEGCWLSSESQQGIQDEDRVCVLINKMMVNNSVSIAGEGIVGRAAFTGNYQWILLNNTRDAYLPEVYPELHYQFSAGMQTVVVIPVLPHGVVQLGSFLPIMEDIEFVNDVKNLILRLGCVSGALLSEDSSTKVSNEKIAGSVTVDPPVIASNCIPLVANSSNLVTNSLASRSVAQSPHPLRGEINNYQGSVLTSQTHNSNQIFDNMCQPKAHSMKKTLVEAEAKAIPANLSSCMQQHSVYNCKFAFNELPNFNRSNLSDCSLKYMEQQTSGIGRQSHVNHNMNPSSTLNMSQLKPDGSKIIEQNQSSGSSSLLGGVPICSGSDLLRTNIINCSVSNPLKVSTSDFSRTPKVGFGLQNNNSMTNAGHCSVPNFTNQSVNIPVDLKHTFASTDQTVEDDLLQAALKLPSLHLEEQVPVGVHIPGVVEDCLNKDVTSQEHTMKMNVKHEEAYAQLASGDDLFDVLGVDLKRRLLNGNWNNLLATDSDANTKYIDKKATCMNLQVVGPDSSYSVNEAISDSDIFSGSATDHLLDAVVSKAQSALKQNSDEISCRTTLTRISTASVPSPACKQVMPDHVVPRGLFDFPKMGVKTAAGETSSLRSGCSKDDIGNCSQTTSIYGSKLSSWVESVSNVKRESSVSTGYSKRPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSESMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTVNLHPMELITT 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02983 960 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 773 822 IPR011598 GO:0046983
Pste1g02983 960 CDD bHLH_AtLHW_like 777 846 - -
Pste1g02983 960 MobiDBLite consensus disorder prediction 763 787 - -
Pste1g02983 960 MobiDBLite consensus disorder prediction 752 787 - -
Pste1g02983 960 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 88 951 IPR043561 GO:0003700|GO:0006355
Pste1g02983 960 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 87 231 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02983 Pste-Chr1 13094353 13101284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02983 574 950 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 54.569 4.57e-117 371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02990 3 22692748 22700248 Pste1g02983 1 13094353 13101284 PCT