Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02970 GCAATCATGGTGGGTGTGATGGAAGTTTGCATACTTGTGTTTTTCACCCTGATGATCACAATGGGTTGTCATGGTGTCACAGACCCAAATGATCTCGAAATTCTGAATAGTTTCAGAAAAGGGTTGAAGAATCCAGAGCTTCTCAAATGGCCAGACAGTGGAAATGACCCTTGTGGCCCTCCTTCATGGACTTATGTGTACTGTTCTGGAGGGAGAGTCACTCAGATTCAGACTAAGAATCTAGGTCTTAAAGGATCATTGCCTCCAAATTTTAATAAGCTCACGGAGCTTCAAAATTTGGGTCTTCAACGCAACAACCTTAGTGGAGCCTTGCCTACTTTCAGTGGATTGTCAAAATTGCAATATGCTTTCTTGGATTACAATGAGTTCGATTCAATCCCATCTGATTTCTTCAATGGACTCACCAGCATCAGGGTCTTAACTTTGGAGGTAAACCCTTTGAATGCAACCACAGGGTGGTCATTTCCTAAGGACTTGGAAAATGCTGTGCAATTGACCAATCTTTCTCTAGTGAATTGTAATTTGGTTGGAACATTGCCTGATTTTCTAGGCACATTACCCTCTCTCACAAATTTGAGGCTTTCATACAACAGATTGACGGGTGGTATTCCGGCTAGTTTTGGTCAGTCTTCAATTCAAGTTTTGTGGTTTAATGATCAACAAGGAGGTGGGATGACAGGTCCTATTGATGTCATTGCTTCAATGACTTTCCTCAGACAGGTTTGGCTTCATGGAAACAAGTTCAGTGGGACAATTCCACAGAACATTGGAAATCTAACTTCCTTGCAGGAGCTCAAACTCCATAGGAACCTATTTGTTGGTTTGATTCCAGATTCCTTGGCAAATATGGACCTTCAGATACTGGTGCTGGATAATAACAGGTTCATGGGTCCAATACCAGAATTTAAGGCTGCCCAAGTATCTTACGATTCCAATTTATTTTGTCAATCTAAGCCTGGACTTGAATGTGCCCCTGAAGTTACTGCACTGCTGGATTTTCTGCATAATCTGAATTATCCTTCAGGTCTTGAATGGCCAGGTAATGATCCGTGTGGAGAGCTGTGGTTTGGATTGAGCTGTGCTCATTCAAAGGTATCTATAATCAATTTACCTAGACAAAAGCTGAATGGTACACTGAGTCCCTCACTGGCCAAGTTAGATTCACTCCTTGAAATTAGGCTTGCAGAAAATAATATTACTGGCCACGTTCCGAGTAATTTTACTGAATTGAAATCTTTGAGGTTGTTGAATCTAGGTAATAACAATGTTGAGCCACCACTGCCAAACTTTCGTGCTGGTGTCAAGGTTATTGTTGACGGTAACCCTCTTCTTGGTAATCAACCTGTAATTAGTCCCAATCCCATGCCCATAACAAGCTCACCACCTTCAGGTGCACAGCCTTCACCAAACAACCCGGCACCGGCTCGGGCTCCATCCCCACCATCCTCCCATATGCAACCTTCTCCGAGTCAGAGTCCAAGATCGACTTTGAATCAGTCAAGGTCTGTCCAGTTAAAGCCCCACCCAAATACCTTCAGAATAGTGGCAATAGTAGCTGGTGCTGCAATCTTTACATTTTTAACTCTTTTGATTATCACTCTATGCATATGTTGCTTGAAGAAGGAAAAAACCTCCTTGGATGCTCCTAGCTCTGTTGTGGTTCACACTAAAGATCCATCTTATTCAGAAAAGATGAATAAATTTGCAGCTTCAGATACCACTGGAAGCTTATCAACAAAGACAGGGGTAAGTTCTCTGACTAACATTAGTTGTGAAACTGAGAGATACAATGTAACTGAGGCTGGCAACATTGCCATCTCTATTCAAGTTCTACGCAAGGTCACCAACAATTTTTCTTCGGAAAATGAGCTAGGCCGTGGTGGGTTTGGAACTGTTTACAAGGGTGAACTAGAAAGTAGCAGAAAAATAGCAGTGAAGAGAATGGAGTGTGGAGCTCTTAGCAGTAGAGCTCTGGAGGAGTTTCAAGCTGAAATAGCTGTTCTTTCCAAGGTTCGGCACCGGAATTTGGTATCCTTGCTAGGCTATTCCATCGAAGGAAATGAAAGACTTTTGGTTTATGAATATATGCCTCTGGGTGCTCTAAGCAGACATCTTTTTCATTGGCAAAGCTTGAAATTAGAGCCTTTGTCTTTGTCACAGAGGCTTACAATAGCACTTGATGTTGCTAGAGCAATGGAATACCTTCACAGTCTTGCACGACAAACCTTTATCCATCGGGACCTAAAATCTTCCAATATTCTACTGGGGGATGATTTTCGTGCAAAAGTTTCAGATTTTGGTCTGGTGAAACTTGCCCCGGATGGTGAGAAGTCTGTGGCAACAAAGCTTGCTGGAACATTTGGATACCTTGCCCCTGAATATGCAGTGATGGGAAAAATCACCACTAAAGTTGATGTGTTCAGCTATGGTGTGGTGTTGATGGAACTTCTGACTGGACTTATGGCTCTTGACGAGAGCCGGTCCGAGGAAAGTCGGTACTTAGCCGAATGGTTTTGGCAAATTAAATCAAGTAAAGAAACGCTTATGGCTGCCATTGACCCAGCTCTTGAAGCAAGTGATGAGAGTTTTGAGAGCATTTCCGTTGTGGCAGAACTTGCAGGACACTGTACTGCTAGGGAAGCAAGTCACAGGCCTGATATGAGACATGCAGTCAGTGTGCTATCTGCAATATTAGAAAAATGGCGACCGGTTGACGAAGAATTTGATAATGGCTCCGGCATTGATCTCAGTCAACCACTTCCCCAGTTATTGAAAGTTTGGAAGGAAGCAGAAGGCAAAGAATCAAGCTATGCAAGCGAACACAGTGAAGGAAGCATTCCTGCCAGGCCCACTGGTTTTGCAGACTCTTTTACTTCTGCTGATGCAAGATGATTTGGAGGTAACTCCAGTGCTATTTGTGGGTCATGTTACTTTGTCTTCACTAATAAAATCCATTTTAAATTGGCCATTTCTGTCTTGGCAACATAAAGATATAATTTATTTGTTTCCAAGTCCTTCTCTTTGGACTTTTAGAGAATACAGACACGGATACGTAGATAAAAAATATTATTTTTATTCTTTTTATGT 3108 0.4225 AIMVGVMEVCILVFFTLMITMGCHGVTDPNDLEILNSFRKGLKNPELLKWPDSGNDPCGPPSWTYVYCSGGRVTQIQTKNLGLKGSLPPNFNKLTELQNLGLQRNNLSGALPTFSGLSKLQYAFLDYNEFDSIPSDFFNGLTSIRVLTLEVNPLNATTGWSFPKDLENAVQLTNLSLVNCNLVGTLPDFLGTLPSLTNLRLSYNRLTGGIPASFGQSSIQVLWFNDQQGGGMTGPIDVIASMTFLRQVWLHGNKFSGTIPQNIGNLTSLQELKLHRNLFVGLIPDSLANMDLQILVLDNNRFMGPIPEFKAAQVSYDSNLFCQSKPGLECAPEVTALLDFLHNLNYPSGLEWPGNDPCGELWFGLSCAHSKVSIINLPRQKLNGTLSPSLAKLDSLLEIRLAENNITGHVPSNFTELKSLRLLNLGNNNVEPPLPNFRAGVKVIVDGNPLLGNQPVISPNPMPITSSPPSGAQPSPNNPAPARAPSPPSSHMQPSPSQSPRSTLNQSRSVQLKPHPNTFRIVAIVAGAAIFTFLTLLIITLCICCLKKEKTSLDAPSSVVVHTKDPSYSEKMNKFAASDTTGSLSTKTGVSSLTNISCETERYNVTEAGNIAISIQVLRKVTNNFSSENELGRGGFGTVYKGELESSRKIAVKRMECGALSSRALEEFQAEIAVLSKVRHRNLVSLLGYSIEGNERLLVYEYMPLGALSRHLFHWQSLKLEPLSLSQRLTIALDVARAMEYLHSLARQTFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGEKSVATKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLMALDESRSEESRYLAEWFWQIKSSKETLMAAIDPALEASDESFESISVVAELAGHCTAREASHRPDMRHAVSVLSAILEKWRPVDEEFDNGSGIDLSQPLPQLLKVWKEAEGKESSYASEHSEGSIPARPTGFADSFTSADAR 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02970 970 SUPERFAMILY L domain-like 27 310 - -
Pste1g02970 970 FunFam receptor protein kinase TMK1 587 702 - -
Pste1g02970 970 MobiDBLite consensus disorder prediction 495 509 - -
Pste1g02970 970 SMART LRR_typ_2 193 217 IPR003591 -
Pste1g02970 970 SMART LRR_typ_2 94 116 IPR003591 -
Pste1g02970 970 SMART LRR_typ_2 117 140 IPR003591 -
Pste1g02970 970 SMART LRR_typ_2 266 289 IPR003591 -
Pste1g02970 970 PANTHER OSJNBA0070M12.3 PROTEIN 9 970 - -
Pste1g02970 970 Gene3D Transferase(Phosphotransferase) domain 1 703 918 - -
Pste1g02970 970 Gene3D Ribonuclease Inhibitor 29 327 IPR032675 -
Pste1g02970 970 Pfam Protein tyrosine and serine/threonine kinase 628 899 IPR001245 GO:0004672|GO:0006468
Pste1g02970 970 FunFam Leucine-rich repeat receptor-like kinase 332 454 - -
Pste1g02970 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
Pste1g02970 970 SUPERFAMILY Protein kinase-like (PK-like) 608 901 IPR011009 -
Pste1g02970 970 Pfam Leucine rich repeat N-terminal domain 332 367 IPR013210 -
Pste1g02970 970 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Pste1g02970 970 FunFam Receptor-like kinase TMK4 29 327 - -
Pste1g02970 970 ProSiteProfiles Protein kinase domain profile. 625 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02970 970 MobiDBLite consensus disorder prediction 461 494 - -
Pste1g02970 970 SUPERFAMILY L domain-like 334 438 - -
Pste1g02970 970 SMART serkin_6 625 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02970 970 Gene3D Ribonuclease Inhibitor 332 454 IPR032675 -
Pste1g02970 970 MobiDBLite consensus disorder prediction 941 970 - -
Pste1g02970 970 CDD STKc_IRAK 631 901 - -
Pste1g02970 970 ProSitePatterns Protein kinases ATP-binding region signature. 631 653 IPR017441 GO:0005524
Pste1g02970 970 Gene3D Phosphorylase Kinase; domain 1 587 702 - -
Pste1g02970 970 FunFam PTI1-like tyrosine-protein kinase 3 703 915 - -
Pste1g02970 970 MobiDBLite consensus disorder prediction 455 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02970 Pste-Chr1 13014972 13018611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02970 83 913 Receptor kinase-like Gene Family AT1G55610 29.663 1.27e-78 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pste1g02970 PK_Tyr_Ser-Thr 1.5e-46 CL0016