Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02965 ATGTTGTGTATACACCATCTGACCCTGGGTGGATTTGGTTCTGTGTATAAAGGGAACCTTCCTGATGGGAGAGAGATAGCAGTCAAACAGCTGAAGATTGGTGGAGGTCAAGGAGAGAGAGAATTCAAGGCTGAAGTGGAAATTATCAGTCGAATACATCATCGCCATTTGGTTTCTTTAGTGGGATATTGCATTGAAGATAACAAAAGACTACTTGTTTATGACTATGTCCCTAACGATACCCTTTATTTTCATCTACATGGGGAAGGTCAGCCTGTGCTAGAATGGGCTAACCGTGTTAAAATTGCAGCCGGTGCAGCACGAGGACTAGCTTATCTCCATGAAGACTGCAACCCTCGGATCATTCACAGGGATATTAAATCCTCAAATATTCTTTTGGATTACAATTACGAAGCAAAGGTGTCAGATTTTGGGCTAGCCAAATTAGCTCTTGATGCAAATACGCATATAACCACACGTGTCATGGGAACTTTTGGGTATGTTGCCCCTGAATATGCTTCAAGTGGCAAATTAACTGAGAAGTCTGATGTATATTCTTTTGGCGTCGTGCTTTTGGAGCTAATTACCGGACGGAAGCCAGTAGATGCATCCCAACCTTTGGGAGATGAAAGCCTAGTTGAATGGGCTCGACCTTTACTGAGTCATGCAATCGACACTGAGGAATTCAATAGTTTGGCAGATTCAAGGCTAGAAAAGAATTATGTTGAGAGTGAATTGTATTGCATGATTGAGGTTGCTGCTGCTTGTGTGAGGCATTCATCTTCAAAGAGACCTCGCATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGGAGGTTCTGATCTAACTAATGGAATGCGACTTGGGGATAGCGAGGCCATTGTACATATTGGAAGAGCTTATTTTGGACCAAAAGATCTTTTCAAACTTAGCCAAGGGGAGACCCTGGTTGAGTTTTGTTGGTTGCAGAATCGGCTAAGGTGCACTGTTGCTTTTGATTCTGGAATTGACTGCATCAGTGTTGGGTCAAGCTCTCAAGAGTTATTTAATTTTCAGAATCTTGCAATTATGTTAAGCATAAAGTTGGATGATGGTATTGTAAGGAAAAGCGTCTCTGTTAACTTTGAATGCAAGCATTGCTGCCTCTGCTAG 1152 0.4219 MLCIHHLTLGGFGSVYKGNLPDGREIAVKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIEDNKRLLVYDYVPNDTLYFHLHGEGQPVLEWANRVKIAAGAARGLAYLHEDCNPRIIHRDIKSSNILLDYNYEAKVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSHAIDTEEFNSLADSRLEKNYVESELYCMIEVAAACVRHSSSKRPRMGQVVRAFDSLGGSDLTNGMRLGDSEAIVHIGRAYFGPKDLFKLSQGETLVEFCWLQNRLRCTVAFDSGIDCISVGSSSQELFNFQNLAIMLSIKLDDGIVRKSVSVNFECKHCCLC 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02965 383 Gene3D Phosphorylase Kinase; domain 1 7 77 - -
Pste1g02965 383 Gene3D Transferase(Phosphotransferase) domain 1 78 285 - -
Pste1g02965 383 ProSiteProfiles Protein kinase domain profile. 1 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02965 383 Pfam Protein tyrosine and serine/threonine kinase 5 273 IPR001245 GO:0004672|GO:0006468
Pste1g02965 383 CDD STKc_IRAK 10 277 - -
Pste1g02965 383 FunFam proline-rich receptor-like protein kinase PERK8 77 288 - -
Pste1g02965 383 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 4 76 - -
Pste1g02965 383 SMART serkin_6 1 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02965 383 SUPERFAMILY Protein kinase-like (PK-like) 5 272 IPR011009 -
Pste1g02965 383 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 7 287 IPR047117 -
Pste1g02965 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02965 Pste-Chr1 12971880 12976543 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02965 10 292 Trihelix Transcription Factor Family AT5G38560 73.776 2.49e-156 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pste1g02965 PK_Tyr_Ser-Thr 3e-44 CL0016