Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02961 ATGGTTCACGAGACAGCTTATATGGATCGCACAGAGAAAAAGGGTGGTATGGTGACTCGTGAGTGTGGAACATCATACACACTCAACATGACGATGATCCCTTGGGTAACAATAAGACTAACATGTACAGTGCTCCTCTTAGTGAGTGTGAAGGGTTTTCCACTACAGACCAGTGAACGGTGGATTGTGAATGAAAGTGGGAATAGGGTGAAGCTTGCATGTGTGAATTGGGTGTCCCATATGGAGGCTGTGGTGGCTGAGGGCTTAAGCCAACAACCTTTGGATGCGATTTCCAAGAGAATCAAGTCTATGGGGTTCAACTGTGTAAGACTCACATGGCCACTTCTCTTGCTCACCAACGACTCTCTTGCTTCTCTCACTGTCAGAGTCTCTTTCCAAAATCTTGGCCTTCTTCAATCCTTCAATGCTGTTCAAGCTTCCAACCCTTCCATCATCGATCTTCCCCTCATCAAAGCTTTCCAGGAAGTGGTGAAAAGCCTGGGAGAGAATGATGTAATGGTGATTTTGGACAATCATGTTACCCAGCCAGGGTGGTGCTGCAGTAACTCTGACGGCAATGGCTTCTTCGGGGACCAATATTTTGATCCTGACCTATGGATTATGGGCCTCACCAAGATGGCAACCATTTTCAAAGGGGTGACTAATGTGGTAGGAATGAGCTTGAGAAATGAGCTAAGAGGTCCCAGACAAAATGTCGACGATTGGTACAGGTACATGCTAAAAGGAGCAGAAGCCGTGCATGGTGCAAATCCAGATGTTCTTGTTATTCTATCTGGGACAAATTTTGACACAGATCTTTCATTCATTAAAAAGGAGGCAGTGAAAATCAGCTTCAACAGGAAACTAGTGTTTGAAGTGCACTGGTACGGCTTCAGTGATGGTAATGCATGGATATCAGGGAATCCAAATCAAGTGTGTGGGGAAGTCACAGGGAATGTGATGAGAAGGGCAGGGTTCTTGTTGGACCAGGGTTGGCCATTGTTTGTGAGTGAGTTTGGGGTGGACTTGAGAGGCACAAATGTGAATGACAATAGATATCTCAACTGCTTCATGGCACTGGTAGCCCAACTTGACTTGGATTGGGCCTTCTGGACACTAGGTGGGAATTATTACATTAGACAAGGAGTTGTTGGAATGATTGAGTATTTTGGTATTCTCAATTCAGATTGGATTCAGGTTAGGAACACTACTTTCTTGCAAAGGATCTCTGCTATCCAACTTCCTTTTCGAGGGCCAGGGTTATCGTCATCGGAAGCTAACCCGTACAAAGTGATATTTCACCCGTTGACAGGTCTTTGCATCTTAAGAAAGTCACCCACTGAACCATTGAAGCTGGGACCTTGTTCTAGTTCTGATGGATGGGAATATACTAACCAGAAAACACTATTAATAAAGGGTACAAATTTGTGTCTACAAGCAGAGGAAGAAGGAAAGCAAACAAAACTTGGAAATATTTGTTCAGGTCCCAATTCAATATGGGAAATGATCTCTGATTCTAAGATGCACCTCTCAAGTCAAATAAAAAATACTTCTAGTGTGTGTCTTGATGTAGACACCGACAACATCATAGTCACCAATACTTGCAAATGTCTAAGCAAAGATAACACGTGCGACCCTGCAAGCCAATGGTTCAAACTCATTGACAGCACAAGGAAGTCAACCTCAACACCATCTATGGACTCCATGTTGAGTTTCTTGCAAAACGGAGTTTCTAGAAACCATTGA 1746 0.4376 MVHETAYMDRTEKKGGMVTRECGTSYTLNMTMIPWVTIRLTCTVLLLVSVKGFPLQTSERWIVNESGNRVKLACVNWVSHMEAVVAEGLSQQPLDAISKRIKSMGFNCVRLTWPLLLLTNDSLASLTVRVSFQNLGLLQSFNAVQASNPSIIDLPLIKAFQEVVKSLGENDVMVILDNHVTQPGWCCSNSDGNGFFGDQYFDPDLWIMGLTKMATIFKGVTNVVGMSLRNELRGPRQNVDDWYRYMLKGAEAVHGANPDVLVILSGTNFDTDLSFIKKEAVKISFNRKLVFEVHWYGFSDGNAWISGNPNQVCGEVTGNVMRRAGFLLDQGWPLFVSEFGVDLRGTNVNDNRYLNCFMALVAQLDLDWAFWTLGGNYYIRQGVVGMIEYFGILNSDWIQVRNTTFLQRISAIQLPFRGPGLSSSEANPYKVIFHPLTGLCILRKSPTEPLKLGPCSSSDGWEYTNQKTLLIKGTNLCLQAEEEGKQTKLGNICSGPNSIWEMISDSKMHLSSQIKNTSSVCLDVDTDNIIVTNTCKCLSKDNTCDPASQWFKLIDSTRKSTSTPSMDSMLSFLQNGVSRNH 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02961 581 CDD RICIN 429 542 IPR000772 -
Pste1g02961 581 Gene3D Glycosidases 53 413 - -
Pste1g02961 581 Pfam Cellulase (glycosyl hydrolase family 5) 91 375 IPR001547 GO:0004553|GO:0071704
Pste1g02961 581 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 41 558 - -
Pste1g02961 581 SUPERFAMILY (Trans)glycosidases 54 405 IPR017853 -
Pste1g02961 581 SUPERFAMILY Ricin B-like lectins 427 553 IPR035992 -
Pste1g02961 581 Gene3D - 431 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02961 Pste-Chr1 12933765 12937933 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02961 53 563 Glycoside Hydrolase AT1G13130 59.612 0.0 649