Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02959 TGTTATTTTGGTGTCAGCTTTTGTAATCTTCTTTCTTCTTCTGTGATCAGTCTTTTTTTTTTATTTTTTTTTTCTGGGGTTGTTGGTTTGATTTGTTTCCCTCACTTTCTTTGACCCATTAGAGGGGATAGGAGTTATTGGTGTTGTGAATTGTGGCTGTGCTTGAAGAGGGGTTCTGGTAGGGTGCATTGAGGGTTTTATTTTATTATATTTGGAAAATTGAGAGTGAGGTTGAGTTTGACAAGGTTGATAGTTTTGGTAGTTGTTGTCTTTTGTGGCTGATGTTTTTGGGGTGGAGCAAGTAGTTCTTCTTTGTAAGCGTGTTTTTTCTTTTCTTCTTTGTGGTTGTTGATATTGGTGGATTGAGTTGTGGAGTTGGGGAGGAGAAGAATGAGGGGTGAAAGGAAAAGGAAGTTGCATTTTAGCAAAATCTATTCATTTGCGTGTGGTAAAAAATCTCTCGAGAGGGATGATTATTCACAAATTGGAGGGAGAGGGTATTCCAGGGTGGTGTTTTGCAATGAGCCAGAGAGTTTTGAGGCTGGGATAAGGAGTTATGCTGATAATTCTGTGAGCTCCACAAAGTATAATCTTGTTACTTTCTTGCCTAAGTCACTTTTTGAGCAGTTCAGAAGGGTGGCTAATTTCTATTTTTTGGTAACTGGCATCTTGGCCTTCACAAAGCTTGCTCCTTATGCAGCTGTCAGTGCTATAGCTCCTCTGATTGTTATTATTGGAGCAACTATGATCAAAGAGGGTATTGAGGATATGCGAAGGAAAAAGCAGGATATGGAGGTGAATAACAGGAGAGTTAAAGTGCATAACGGGCATGGAACTTTTGAATATACTGAGTGGAAGAATCTGAAGGTGGGGCATATAGTGAAGATAATGAAGGATGAATTCTTCCCTGCTGACCTCCTACTGCTTTCCTCCAGTTACGAGGATGCATTCTGCTATGTTGAGACCATGAACTTGGATGGGGAGACAAATTTGAAGTTAAGACAAGGGTTGGAAGTAACTTGTTCCTTACATGAGGACTTTCATTTCAGAGATTTTAAAGCTACAATCAAATGTGAAGATCCAAATGCAAATTTGTATTCATTTATTGGGAGCATGGAGTATGAAGAACAACAATATCCCCTTTCTCCTCAGCAACTTCTTCTAAGAGACTCTAAACTTCGTAACACAGAATACATATTTGGAGCAGTTATCTTCACTGGTCATGACACGAAAGTCATCCAAAATTCGACTGATCCTCCTTCAAAGAGAAGCAAGGTTGAGAAGAAGATGGATAGGGTTATCTACTTCTTGTTTTGTATTTTGTTTCTATTGGCATTTGTTGGATCTATTTTCTTTGGCATTGCAACTGAAGATGATTTGCACAATGGATTGATGAAAAGGTGGTATCTAAGACCAGACGACTCTACGATTTTCTTTGATCCTAAAAGAGCACCTGCTGCTGCCATATTTCATAGTTTGACAGCCTTAATGTTATATGGTTTTTTCATTCCCATCTCATTGTATGTTTCAATAGAAATTGTTAAAGTCCTTCAGAGCATCTTCATCAATCAAGATATCCACATGTACTATGAAGATGCAGACAAACCAGCCCATGCGCGTACTTCAAACTTGAATGAGGAACTTGGTCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCAATTGCTGGGGTTGCTTATGGCCGTGGTGTTACAGAGGTTGAGAGGGCAATGAATAGAAAAAATGGTTCTTATTTGATTGATAACAAAAGGGAATCTCCTGTCAGAAATGCTCCGATCAAAGGATTTAACTTCACAGATGAAAGGATAATGAATGGTAAATGGATTAATGAGCCTCATGCTAATGTTATCAAGAATTTTTTCCGCTTATTGGCAATCTGCCACACAGCCATACCAGAAGTTGATGATGACACAGGAAATGTCTCATATGAGACTGAATCTCCAGATGAAGCGGCATTTGTGATTGCAGCGAGAGAAATTGGTTTTGAATTCTATAAAAGGACTCAGACTAGTTTATCAATGTCTGAATTGGACCCAGTTTCTGGTGACAAAATTGAAAGGATGTACAAACTTCTCAATGTTTTAGAATTCAATAGCTCAAGAAAGCGAATGTCTGTGATAGTGAAAGATGAAGAAGGGAGAATTTTGCTACTCAGTAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGGATGGAAGAGAGTTTGAAGAGAAAACCATGGAACATGTGCATGAATATGCTGATGCAGGTCTAAGGACCTTGATCCTGGCATATCGTGAACTTGATGAAAACCAATACAAGGAGTTTGAAAATAAGTTTTCTCAAGCGAAGAATTTGGTTAGTGAAGATCGGGAAACACGGATTGAGGAAATATCAGATGAGATTGAGAGGAATCTAATCCTTCTTGGTGCCACTGCCGTAGAGGACAAGCTCCAAAATGGGGTTCCTGATTGCATAGACAAGCTTGCCCAAGCTGGAATTAAGATCTGGGTTTTGACTGGGGATAAAATGGAGACTGCTATCAATATTGGGTTTGCTTGTAGTTTACTTAGACAAGGAATGAAGCAGATTATAATTCATTTGGAAACTCCTGAAATTCAAGCATTGGAGAAGGGTGGAGACAAGGTGGCTATTGTCAAGGCTTCAAGAGAAATTATCCGCTATCAAATATCTGAAGCTACCCAACAGCTCACTGCCTCCAGAGGAACCTCTCAGCAAGCATTTGCTCTAATTATTGATGGAAAATCACTTACCTATGCTCTAGAGGATAATATGAAGAACATGTTTCTGGACCTTGCAATTCGTTGTGCATCTGTTATCTGCTGCCGTTCCTCACCAAAACAGAAAGCCCTGGTCACTAGACTGGTCAAATCTGGTACTGGTAAAACTACATTAGCTATTGGTGATGGAGCTAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGGATTGGAATCAGTGGGATTGAAGGAATGCAGGCGGTTATGTCTAGTGATATTGCAATTGCACAGTTCCGTTATTTGGAAAGATTACTTCTTGTGCACGGACATTGGTGTTACCGAAGGATCTCATCAATGATATGCTATTTCTTCTACAAAAACATCACATTTGGCTTTACTCTATTCTTATATGAGGTTTATGCATCATTCTCCGGGCAACCTGCGTACAATGACTGGTTTTTGTCACTCTATAACGTCTTCTTTTCATCACTTCCTGTGGTTGCTCTTGGGGTCTTTGACCAGGATGTGTCTGCTCGATACTGTCTGAGGTTTCCGATGTTATATCAAGAAGGCGTGCAAAATCTCCTCTTTAGCTGGCGTCGAATTTTCAGCTGGATGCTTAACGGCTTTGTTAGTGCCATAATAATTTTCTACTTCTGCACAAAAGCAATGGAGATTCAAGCCTTTGATGAGAATGGAAGAACTGCTGGGAGGGATATACTTGGGGCAACTATGTATACTTGTGTGGTTTGGGTTGTGAACTTGCAAATGGCTCTTTCTATAAGTTACTTCACCTTGATTCAACATGTTTTCATCTGGGGCTCCATTGCTGTCTGGTACTTTTTCCTCCTGGCATACGGAGCAATGTCTCCAAACATATCTGGAAATGCTTACAAAGTCTTCATTGAAACTCTTGCTCCATCTCCTTCCTTTTGGATTGTGACATTGTTTGTGGCAATCTCAACACTTATCCCATACTTCTGTTACTCAGCAATACAGATGAGGTTCTTTCCCTTATATCACGAAATGGTACAATGGATAAGGCATGAGGGAAAGACAAATGATCCTGAATTTGTCGCCATGGTGCGGCAAGTATCAATCCGGCCAACAACTGTCGGTCCAACAGCTCGCTTAGCCGCAAAGGATAATGACTTTAGAGACAGCGCCACTAACCATAGATAGTATTGACATATTCTTGTTTCCACAGTCAAATGATGTAGTTTGTGTATGCAGCTTTATTGTGCCTGTAGCTCTGGAATTTCTTACTTCCATGGTAATGGCATGGTGCGCACAAACAAACCATCAATTTGTCTGCGAAGTTGAATAGATGAATAAAAATGTATACCTATTTTTTTGGCCGTTTGAGGTTGTACAGTGTTAATTTATAGTCTGCTTTTTGTATCATAGATTGTAGCAGTTTCCATGTATAGCTTAAATTCTTTGTAGGATTATATAGCATAGATTATTATATAAATCAGTTCATTCCTTTTCAG 4277 0.3958 MRGERKRKLHFSKIYSFACGKKSLERDDYSQIGGRGYSRVVFCNEPESFEAGIRSYADNSVSSTKYNLVTFLPKSLFEQFRRVANFYFLVTGILAFTKLAPYAAVSAIAPLIVIIGATMIKEGIEDMRRKKQDMEVNNRRVKVHNGHGTFEYTEWKNLKVGHIVKIMKDEFFPADLLLLSSSYEDAFCYVETMNLDGETNLKLRQGLEVTCSLHEDFHFRDFKATIKCEDPNANLYSFIGSMEYEEQQYPLSPQQLLLRDSKLRNTEYIFGAVIFTGHDTKVIQNSTDPPSKRSKVEKKMDRVIYFLFCILFLLAFVGSIFFGIATEDDLHNGLMKRWYLRPDDSTIFFDPKRAPAAAIFHSLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYEDADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERAMNRKNGSYLIDNKRESPVRNAPIKGFNFTDERIMNGKWINEPHANVIKNFFRLLAICHTAIPEVDDDTGNVSYETESPDEAAFVIAAREIGFEFYKRTQTSLSMSELDPVSGDKIERMYKLLNVLEFNSSRKRMSVIVKDEEGRILLLSKGADSVMFERLAKDGREFEEKTMEHVHEYADAGLRTLILAYRELDENQYKEFENKFSQAKNLVSEDRETRIEEISDEIERNLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLETPEIQALEKGGDKVAIVKASREIIRYQISEATQQLTASRGTSQQAFALIIDGKSLTYALEDNMKNMFLDLAIRCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGIEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYNVFFSSLPVVALGVFDQDVSARYCLRFPMLYQEGVQNLLFSWRRIFSWMLNGFVSAIIIFYFCTKAMEIQAFDENGRTAGRDILGATMYTCVVWVVNLQMALSISYFTLIQHVFIWGSIAVWYFFLLAYGAMSPNISGNAYKVFIETLAPSPSFWIVTLFVAISTLIPYFCYSAIQMRFFPLYHEMVQWIRHEGKTNDPEFVAMVRQVSIRPTTVGPTARLAAKDNDFRDSATNHR 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02959 1191 NCBIfam phospholipid-translocating P-type ATPase 56 1143 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pste1g02959 1191 Pfam Phospholipid-translocating ATPase N-terminal 41 107 IPR032631 -
Pste1g02959 1191 Gene3D - 537 672 IPR023299 GO:0000166
Pste1g02959 1191 NCBIfam HAD-IC family P-type ATPase 829 940 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste1g02959 1191 SUPERFAMILY Calcium ATPase, transduction domain A 144 284 IPR008250 -
Pste1g02959 1191 PRINTS P-type cation-transporting ATPase superfamily signature 858 877 - -
Pste1g02959 1191 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Pste1g02959 1191 Pfam Phospholipid-translocating P-type ATPase C-terminal 886 1136 IPR032630 -
Pste1g02959 1191 SUPERFAMILY HAD-like 420 913 IPR036412 -
Pste1g02959 1191 Gene3D - 689 898 IPR023214 -
Pste1g02959 1191 Pfam Cation transport ATPase (P-type) 525 619 - -
Pste1g02959 1191 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 30 1147 - -
Pste1g02959 1191 SFLD Haloacid Dehalogenase 407 909 - -
Pste1g02959 1191 Coils Coil 650 670 - -
Pste1g02959 1191 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 432 657 IPR023299 GO:0000166
Pste1g02959 1191 CDD P-type_ATPase_APLT_Dnf-like 58 1018 - -
Pste1g02959 1191 FunFam Phospholipid-transporting ATPase 693 898 - -
Pste1g02959 1191 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1136 IPR023298 -
Pste1g02959 1191 Gene3D - 117 287 - -
Pste1g02959 1191 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Pste1g02959 1191 FunFam Phospholipid-transporting ATPase 117 287 - -
Pste1g02959 1191 FunFam Phospholipid-transporting ATPase 535 693 - -
Pste1g02959 1191 SFLD p-type atpase 407 909 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02959 Pste-Chr1 12924027 12932426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02959 9 1186 Primary Pumps ATPases AT1G68710 71.746 0.0 1852