Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02929 CTTCTCGTGTCTTCCTCACTTTATAACCCTTTCTCTCGTCTCACTCTTCTCCAACCCTCCACTCTCCAACTTCATCTTCTTCATTAACTCTCTCTCAAAACATTAACCACATAACCAAAACTCCCATGATGCCCCCTCAGCAAGAAACTTCAATTACCTCAAATATTCCGGTCACCCCCACCCGCCCGGAAAACAGCTCCGTCCACGCCCAGCCGCCAACCTCCGCCACCACCCACGTCGTTAAAGCCACTTTCGTGAGCAATGACATTGACAACAATAATGATTCTCACCATCACCCTCCTCCTTCAGCACCCAGATTTTCTCTTCCTCAACAATCCTTGCGCCCGATTACCCTCAAATTTGAGGATGTTTCCTACAGCATAACCTTGGGAAGGGACAAGAAGGGTTGTGTATCTTCTCAAAAGCCAAAGCAAACAAGGACAGTGCTGAATGGTGTGACCGGTATGGTGGGGCCAGGGGAGGTGATGGCAATGTTGGGTCCCTCTGGGAGTGGCAAAACCACCTTACTAACCGCCCTTGCCGGCCGTCTCGCCGGAAAACTTTCCGGCTCCATTACATACAACAACCGCCCATTCTCCAGCTCCCTGAGGCGCAACATAGGGTTTGTGTCCCAAGATGATGTGTTATACCCTCACCTCACTGTGCTTGAGACTTTGACCTACGCTGCCATGTTAAAGCTTCCCAAGAGTTTGACTAAGGAAGAGAAAATGGAGCAAGTTGAAATGATCATTGTGGAGTTAGGGCTGTCTCCGTGTCGGAACAGCCCTGTTGGCGGTGGTGCCGCCTTGTTCCGGGGGATTTCAGGTGGGGAGCAAAAGCGGGTCGGCATTGGACAAGAGATGCTGGTCAACCCAAGTTTGTTGCTCCTAGACGAGCCAACTTCTGGGTTAGACTCTACCACGGCCCAGCGTATTGTGACGATGCTTTGTAGCATCGCCAAAAATGGCCGGACCGTGGTGACTACAATACACCAGCCTTCCAGCCGGTTGTATTGGATGTTTGATAAGGTGGTGGTGTTGTCCGACGGGCACCCGATTTTCACCGGGCAAACCGGTCGGGTCATGGATTATCTTGGCAGCATTGGGTTTGTACCCGCTTTCAGTTTTGTGAACCCAGCTGATTTTCTGCTTGACCTTGCTAATGGCATAGTTGCTGATGTCAAACAAGATGACCAGATAGATCACCATGAGGATCAAGCTTCAATTAAACAGTTCCTAGTTTCATCCTATAAGAAGAACTTATACCCTCTTCTCAAACAAGAGATTCAGCAGAATCATAGAGAACTAGAATTTTTTACTTCAGGAACACCTAGAAGTTTAAGAATTTTCCAAGTTTTGTCTGTCTCAATTCTCTCAGGACTTCTTTGGTGGCATTCTGATCCCTCACATATCCAAGACCAGGTAGGCCTGCTATTCTTCTTCTCCATCTTTTGGGGATTCTTCCCTCTCTTTAATGCCATCTTTGCTTTTCCTTTGGATCGGCCAATGCTGCTGAGAGAAAGATCATCAGGCATGTACTATCTCTCATCCTATTATGTAGCCAGAATGGTAGGAGACTTACCAATGGAGCTTGCACTTCCTACCATCTTTGTAACAATCTCTTATTGGATGGGAGGTCTCAAGCCTTGTTTGGTTACATTTGTGTTAACCCTCTTGATCATGCTTTTCAATGTGCTGGTTTCTCAAGGAATAGGCCTAGCACTTGGGGCCATTCTAATGGATGTCAAACAAGGCACAACCTTAGCTTCAGTGACTATGTTGGTGTTTCTTTTAGCTGGGGGTTACTACATTCAGCAAATTCCATTTTTTATAGCTTGGCTGAAGTACATTTCTTTCAGTCACTACTGCTATAAGCTTCTTGTGGGAGTTCAGTTCTCAGTGAATGAGGTCTATGACTGTGGACCAGGGTTACATTGTAGGACTAGAGATTTTCCTGCCATTAAGTGTCTAGCTCTTGATAGTTTGTGGGGAGATGTGGCTGCATTGACTGTAATGTTGGTTGGATACAGAGTTGTTGCTTATTTTGCTTTGAGGATGGGGCTGCATCATTAA 2072 0.4672 MMPPQQETSITSNIPVTPTRPENSSVHAQPPTSATTHVVKATFVSNDIDNNNDSHHHPPPSAPRFSLPQQSLRPITLKFEDVSYSITLGRDKKGCVSSQKPKQTRTVLNGVTGMVGPGEVMAMLGPSGSGKTTLLTALAGRLAGKLSGSITYNNRPFSSSLRRNIGFVSQDDVLYPHLTVLETLTYAAMLKLPKSLTKEEKMEQVEMIIVELGLSPCRNSPVGGGAALFRGISGGEQKRVGIGQEMLVNPSLLLLDEPTSGLDSTTAQRIVTMLCSIAKNGRTVVTTIHQPSSRLYWMFDKVVVLSDGHPIFTGQTGRVMDYLGSIGFVPAFSFVNPADFLLDLANGIVADVKQDDQIDHHEDQASIKQFLVSSYKKNLYPLLKQEIQQNHRELEFFTSGTPRSLRIFQVLSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLDRPMLLRERSSGMYYLSSYYVARMVGDLPMELALPTIFVTISYWMGGLKPCLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQGTTLASVTMLVFLLAGGYYIQQIPFFIAWLKYISFSHYCYKLLVGVQFSVNEVYDCGPGLHCRTRDFPAIKCLALDSLWGDVAALTVMLVGYRVVAYFALRMGLHH 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02929 648 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 50 638 - -
Pste1g02929 648 FunFam ABC transporter G family member 22 95 326 - -
Pste1g02929 648 MobiDBLite consensus disorder prediction 46 68 - -
Pste1g02929 648 Pfam ABC-2 type transporter 405 590 IPR013525 GO:0016020|GO:0140359
Pste1g02929 648 Pfam ABC transporter 108 260 IPR003439 GO:0005524
Pste1g02929 648 Gene3D - 78 325 IPR027417 -
Pste1g02929 648 SMART AAA_5 117 309 IPR003593 GO:0016887
Pste1g02929 648 MobiDBLite consensus disorder prediction 1 34 - -
Pste1g02929 648 Pfam ABC-2 type transporter 289 369 IPR043926 GO:0140359
Pste1g02929 648 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 325 IPR027417 -
Pste1g02929 648 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 77 332 IPR003439 GO:0005524
Pste1g02929 648 ProSitePatterns ABC transporters family signature. 232 246 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02929 Pste-Chr1 12650733 12655647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02929 107 308 Calmodulin-binding Proteins AT2G36910 29.327 1.52e-11 65.9